Hb_010775_050

Information

Type -
Description -
Location Contig10775: 57672-61845
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010775_050 0.0 - - -
2 Hb_001773_010 0.1482334931 - - -
3 Hb_005451_020 0.2158451763 - - PREDICTED: uncharacterized protein LOC104105697 [Nicotiana tomentosiformis]
4 Hb_000078_170 0.2703267902 - - -
5 Hb_001709_130 0.2953135848 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
6 Hb_001965_020 0.2989753107 - - hypothetical protein B456_013G048700 [Gossypium raimondii]
7 Hb_000330_080 0.2990527463 - - auxilin, putative [Ricinus communis]
8 Hb_002637_020 0.3000963824 - - -
9 Hb_004195_260 0.300772504 desease resistance Gene Name: NB-ARC Disease resistance protein RPH8A, putative [Ricinus communis]
10 Hb_183574_010 0.3050799148 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
11 Hb_011639_150 0.3147662119 - - -
12 Hb_021068_010 0.318262382 - - PREDICTED: MADS-box transcription factor 23-like isoform X1 [Jatropha curcas]
13 Hb_009973_020 0.3266942131 - - PREDICTED: uncharacterized protein LOC104889111 [Beta vulgaris subsp. vulgaris]
14 Hb_002249_210 0.3271224095 - - -
15 Hb_000703_300 0.3304998438 - - -
16 Hb_006911_030 0.3401075184 desease resistance Gene Name: NB-ARC hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
17 Hb_005962_010 0.3468389067 - - -
18 Hb_008556_020 0.3501910225 - - -
19 Hb_002506_100 0.356115171 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]
20 Hb_011574_010 0.356201063 - - -

Gene co-expression network

sample Hb_010775_050 Hb_010775_050 Hb_001773_010 Hb_001773_010 Hb_010775_050--Hb_001773_010 Hb_005451_020 Hb_005451_020 Hb_010775_050--Hb_005451_020 Hb_000078_170 Hb_000078_170 Hb_010775_050--Hb_000078_170 Hb_001709_130 Hb_001709_130 Hb_010775_050--Hb_001709_130 Hb_001965_020 Hb_001965_020 Hb_010775_050--Hb_001965_020 Hb_000330_080 Hb_000330_080 Hb_010775_050--Hb_000330_080 Hb_001773_010--Hb_000078_170 Hb_001773_010--Hb_005451_020 Hb_001773_010--Hb_001965_020 Hb_002637_020 Hb_002637_020 Hb_001773_010--Hb_002637_020 Hb_001773_010--Hb_000330_080 Hb_001160_010 Hb_001160_010 Hb_005451_020--Hb_001160_010 Hb_004195_260 Hb_004195_260 Hb_005451_020--Hb_004195_260 Hb_002249_210 Hb_002249_210 Hb_005451_020--Hb_002249_210 Hb_021068_010 Hb_021068_010 Hb_005451_020--Hb_021068_010 Hb_005962_010 Hb_005962_010 Hb_000078_170--Hb_005962_010 Hb_011639_150 Hb_011639_150 Hb_000078_170--Hb_011639_150 Hb_000078_170--Hb_000330_080 Hb_008556_020 Hb_008556_020 Hb_000078_170--Hb_008556_020 Hb_000078_170--Hb_001709_130 Hb_002311_230 Hb_002311_230 Hb_000078_170--Hb_002311_230 Hb_001709_130--Hb_000330_080 Hb_001709_130--Hb_011639_150 Hb_004884_020 Hb_004884_020 Hb_001709_130--Hb_004884_020 Hb_001009_100 Hb_001009_100 Hb_001709_130--Hb_001009_100 Hb_004361_020 Hb_004361_020 Hb_001709_130--Hb_004361_020 Hb_001031_050 Hb_001031_050 Hb_001965_020--Hb_001031_050 Hb_001965_020--Hb_000330_080 Hb_032920_100 Hb_032920_100 Hb_001965_020--Hb_032920_100 Hb_001965_020--Hb_001709_130 Hb_001965_020--Hb_021068_010 Hb_183574_010 Hb_183574_010 Hb_001965_020--Hb_183574_010 Hb_000330_080--Hb_032920_100 Hb_008123_010 Hb_008123_010 Hb_000330_080--Hb_008123_010 Hb_000330_080--Hb_004884_020 Hb_003058_020 Hb_003058_020 Hb_000330_080--Hb_003058_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.052181 0 0 0 0.259384 0.0934331
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0395778 0.181191

CAGE analysis