Hb_010803_010

Information

Type -
Description -
Location Contig10803: 18699-23358
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa022673mg
description hypothetical protein
nr
ID XP_007220718.1
description hypothetical protein PRUPE_ppa022673mg [Prunus persica]
swissprot
ID P0CT39
description Transposon Tf2-6 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-6 PE=3 SV=1
trembl
ID M5X787
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description dna rna polymerases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010803_010 0.0 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
2 Hb_002641_110 0.1962910779 - - PREDICTED: uncharacterized protein LOC103448574 [Malus domestica]
3 Hb_151978_010 0.2921947888 - - -
4 Hb_028271_010 0.3096448895 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
5 Hb_039635_010 0.3222253316 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
6 Hb_017214_050 0.3343911979 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
7 Hb_002027_370 0.3344079169 - - conserved hypothetical protein [Ricinus communis]
8 Hb_074683_010 0.3357098205 - - -
9 Hb_002750_020 0.3389591858 - - PREDICTED: tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Jatropha curcas]
10 Hb_168418_010 0.3409975202 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
11 Hb_014556_020 0.3526565121 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_001377_390 0.3545278723 - - hypothetical protein POPTR_0002s17390g [Populus trichocarpa]
13 Hb_001994_010 0.3555177399 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
14 Hb_015836_010 0.3564494108 - - -
15 Hb_000359_240 0.37037328 - - PREDICTED: uncharacterized protein LOC105646039 [Jatropha curcas]
16 Hb_062135_010 0.3725485571 - - hypothetical protein POPTR_0011s036602g, partial [Populus trichocarpa]
17 Hb_000227_030 0.3783895046 - - -
18 Hb_000252_140 0.3811730043 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_005389_130 0.3824174684 - - hypothetical protein CICLE_v10009852mg [Citrus clementina]
20 Hb_002823_020 0.3894018928 - - -

Gene co-expression network

sample Hb_010803_010 Hb_010803_010 Hb_002641_110 Hb_002641_110 Hb_010803_010--Hb_002641_110 Hb_151978_010 Hb_151978_010 Hb_010803_010--Hb_151978_010 Hb_028271_010 Hb_028271_010 Hb_010803_010--Hb_028271_010 Hb_039635_010 Hb_039635_010 Hb_010803_010--Hb_039635_010 Hb_017214_050 Hb_017214_050 Hb_010803_010--Hb_017214_050 Hb_002027_370 Hb_002027_370 Hb_010803_010--Hb_002027_370 Hb_002641_110--Hb_028271_010 Hb_002641_110--Hb_151978_010 Hb_014556_020 Hb_014556_020 Hb_002641_110--Hb_014556_020 Hb_001377_390 Hb_001377_390 Hb_002641_110--Hb_001377_390 Hb_002641_110--Hb_039635_010 Hb_151978_010--Hb_039635_010 Hb_000227_030 Hb_000227_030 Hb_151978_010--Hb_000227_030 Hb_002750_020 Hb_002750_020 Hb_151978_010--Hb_002750_020 Hb_168418_010 Hb_168418_010 Hb_151978_010--Hb_168418_010 Hb_001221_460 Hb_001221_460 Hb_028271_010--Hb_001221_460 Hb_017170_010 Hb_017170_010 Hb_028271_010--Hb_017170_010 Hb_001102_100 Hb_001102_100 Hb_028271_010--Hb_001102_100 Hb_012754_030 Hb_012754_030 Hb_028271_010--Hb_012754_030 Hb_004414_040 Hb_004414_040 Hb_028271_010--Hb_004414_040 Hb_039635_010--Hb_000227_030 Hb_179763_020 Hb_179763_020 Hb_039635_010--Hb_179763_020 Hb_036285_010 Hb_036285_010 Hb_039635_010--Hb_036285_010 Hb_039635_010--Hb_002750_020 Hb_017214_050--Hb_002027_370 Hb_074683_010 Hb_074683_010 Hb_017214_050--Hb_074683_010 Hb_001994_010 Hb_001994_010 Hb_017214_050--Hb_001994_010 Hb_015836_010 Hb_015836_010 Hb_017214_050--Hb_015836_010 Hb_005389_130 Hb_005389_130 Hb_017214_050--Hb_005389_130 Hb_001066_010 Hb_001066_010 Hb_017214_050--Hb_001066_010 Hb_002027_370--Hb_074683_010 Hb_002027_370--Hb_001994_010 Hb_002027_370--Hb_015836_010 Hb_002027_370--Hb_005389_130 Hb_002027_370--Hb_001066_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00428312 0 0 0 0 0.00388643
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00763339 0 0.00302209 0

CAGE analysis