Hb_010810_010

Information

Type -
Description -
Location Contig10810: 369-6064
Sequence    

Annotation

kegg
ID tcc:TCM_019409
description Plastid hexose transporter isoform 1
nr
ID XP_012077997.1
description PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
swissprot
ID Q56ZZ7
description Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2
trembl
ID A0A067KL20
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13001 PE=3 SV=1
Gene Ontology
ID GO:0016021
description plastidic glucose transporter 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02465: 2384-2792 , PASA_asmbl_02466: 3187-5814
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010810_010 0.0 - - PREDICTED: plastidic glucose transporter 4 [Jatropha curcas]
2 Hb_052805_010 0.109507381 - - hypothetical protein POPTR_0009s03650g [Populus trichocarpa]
3 Hb_011214_160 0.1101479885 - - PREDICTED: coatomer subunit delta [Jatropha curcas]
4 Hb_007894_010 0.1132680252 - - PREDICTED: uncharacterized protein LOC105632963 [Jatropha curcas]
5 Hb_010407_140 0.1138651812 - - PREDICTED: malate dehydrogenase [Jatropha curcas]
6 Hb_000139_530 0.1145618801 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004223_050 0.1169177981 - - hexokinase [Manihot esculenta]
8 Hb_011282_060 0.1188752976 - - PREDICTED: bifunctional dihydrofolate reductase-thymidylate synthase 1 [Jatropha curcas]
9 Hb_001482_050 0.1210050097 - - COR413-PM2, putative [Ricinus communis]
10 Hb_006570_160 0.1217221354 - - PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Jatropha curcas]
11 Hb_000028_600 0.1217620716 - - glutaredoxin-1, grx1, putative [Ricinus communis]
12 Hb_000127_140 0.1230272771 - - transporter-related family protein [Populus trichocarpa]
13 Hb_005797_010 0.1252697068 - - PREDICTED: lysophospholipid acyltransferase 1-like [Jatropha curcas]
14 Hb_058620_070 0.1254933372 - - unnamed protein product [Chondrus crispus]
15 Hb_001427_160 0.1276581246 - - o-methyltransferase, putative [Ricinus communis]
16 Hb_000197_020 0.1286310233 - - PREDICTED: protein RER1A [Jatropha curcas]
17 Hb_000666_100 0.1287979614 - - Actin-related protein 2/3 complex subunit 2 isoform 2 [Theobroma cacao]
18 Hb_001141_420 0.1289405498 - - PREDICTED: uncharacterized protein LOC105631978 isoform X1 [Jatropha curcas]
19 Hb_002660_150 0.129737187 - - PREDICTED: uncharacterized protein LOC105642207 isoform X1 [Jatropha curcas]
20 Hb_000260_470 0.1302492388 - - PREDICTED: uncharacterized protein LOC105649044 [Jatropha curcas]

Gene co-expression network

sample Hb_010810_010 Hb_010810_010 Hb_052805_010 Hb_052805_010 Hb_010810_010--Hb_052805_010 Hb_011214_160 Hb_011214_160 Hb_010810_010--Hb_011214_160 Hb_007894_010 Hb_007894_010 Hb_010810_010--Hb_007894_010 Hb_010407_140 Hb_010407_140 Hb_010810_010--Hb_010407_140 Hb_000139_530 Hb_000139_530 Hb_010810_010--Hb_000139_530 Hb_004223_050 Hb_004223_050 Hb_010810_010--Hb_004223_050 Hb_000720_040 Hb_000720_040 Hb_052805_010--Hb_000720_040 Hb_011282_060 Hb_011282_060 Hb_052805_010--Hb_011282_060 Hb_001366_370 Hb_001366_370 Hb_052805_010--Hb_001366_370 Hb_000510_300 Hb_000510_300 Hb_052805_010--Hb_000510_300 Hb_000666_100 Hb_000666_100 Hb_052805_010--Hb_000666_100 Hb_000783_010 Hb_000783_010 Hb_052805_010--Hb_000783_010 Hb_003998_040 Hb_003998_040 Hb_011214_160--Hb_003998_040 Hb_001703_050 Hb_001703_050 Hb_011214_160--Hb_001703_050 Hb_000371_090 Hb_000371_090 Hb_011214_160--Hb_000371_090 Hb_001051_070 Hb_001051_070 Hb_011214_160--Hb_001051_070 Hb_000197_020 Hb_000197_020 Hb_011214_160--Hb_000197_020 Hb_011214_160--Hb_000139_530 Hb_007894_010--Hb_010407_140 Hb_000127_140 Hb_000127_140 Hb_007894_010--Hb_000127_140 Hb_005701_120 Hb_005701_120 Hb_007894_010--Hb_005701_120 Hb_007894_010--Hb_000197_020 Hb_000136_100 Hb_000136_100 Hb_007894_010--Hb_000136_100 Hb_001957_010 Hb_001957_010 Hb_007894_010--Hb_001957_010 Hb_001633_080 Hb_001633_080 Hb_010407_140--Hb_001633_080 Hb_010407_140--Hb_000197_020 Hb_006570_160 Hb_006570_160 Hb_010407_140--Hb_006570_160 Hb_010407_140--Hb_000127_140 Hb_010407_140--Hb_011282_060 Hb_005797_010 Hb_005797_010 Hb_000139_530--Hb_005797_010 Hb_086639_080 Hb_086639_080 Hb_000139_530--Hb_086639_080 Hb_001087_030 Hb_001087_030 Hb_000139_530--Hb_001087_030 Hb_000009_400 Hb_000009_400 Hb_000139_530--Hb_000009_400 Hb_004102_170 Hb_004102_170 Hb_000139_530--Hb_004102_170 Hb_004223_050--Hb_000127_140 Hb_004754_050 Hb_004754_050 Hb_004223_050--Hb_004754_050 Hb_000721_030 Hb_000721_030 Hb_004223_050--Hb_000721_030 Hb_010931_130 Hb_010931_130 Hb_004223_050--Hb_010931_130 Hb_012258_010 Hb_012258_010 Hb_004223_050--Hb_012258_010 Hb_001195_060 Hb_001195_060 Hb_004223_050--Hb_001195_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.76723 4.97054 13.3081 22.4993 8.87495 5.76995
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.9736 6.18366 7.92704 9.13549 6.38013

CAGE analysis