Hb_010812_120

Information

Type -
Description -
Location Contig10812: 79206-85404
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09020g
description hypothetical protein
nr
ID KDP21622.1
description hypothetical protein JCGZ_03293 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JCU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03293 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02505: 79687-85367 , PASA_asmbl_02506: 79949-85002 , PASA_asmbl_02507: 79968-81702
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010812_120 0.0 - - hypothetical protein JCGZ_03293 [Jatropha curcas]
2 Hb_003349_090 0.0449775037 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
3 Hb_001633_210 0.056955688 - - PREDICTED: RING finger protein 10 isoform X2 [Jatropha curcas]
4 Hb_089032_030 0.065101559 - - PREDICTED: 3-isopropylmalate dehydrogenase 2, chloroplastic-like [Jatropha curcas]
5 Hb_000250_060 0.0651544846 - - PREDICTED: 28S ribosomal protein S29, mitochondrial [Jatropha curcas]
6 Hb_000016_160 0.0674182377 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48 [Jatropha curcas]
7 Hb_003994_260 0.0708818276 - - PREDICTED: uncharacterized protein LOC105646151 [Jatropha curcas]
8 Hb_000614_250 0.0718247941 - - PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Jatropha curcas]
9 Hb_001545_170 0.0740489337 - - PREDICTED: cleavage stimulating factor 64 isoform X1 [Jatropha curcas]
10 Hb_000003_230 0.0744601235 - - PREDICTED: FAD synthetase 2, chloroplastic [Jatropha curcas]
11 Hb_001314_070 0.0746842268 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004837_160 0.0754785429 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H3 isoform X1 [Jatropha curcas]
13 Hb_006615_240 0.0755372528 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
14 Hb_000483_260 0.0764521526 - - PREDICTED: dihydroorotase, mitochondrial isoform X1 [Populus euphratica]
15 Hb_003697_040 0.0781319115 - - hypothetical protein B456_005G209600 [Gossypium raimondii]
16 Hb_000069_420 0.0783242018 - - Beclin-1, putative [Ricinus communis]
17 Hb_003304_020 0.0806292375 - - Polyadenylate-binding protein RBP47C [Glycine soja]
18 Hb_004324_090 0.0809673052 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
19 Hb_012490_070 0.0811444741 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004889_010 0.0812245744 - - Vacuolar protein sorting-associated protein-like protein [Medicago truncatula]

Gene co-expression network

sample Hb_010812_120 Hb_010812_120 Hb_003349_090 Hb_003349_090 Hb_010812_120--Hb_003349_090 Hb_001633_210 Hb_001633_210 Hb_010812_120--Hb_001633_210 Hb_089032_030 Hb_089032_030 Hb_010812_120--Hb_089032_030 Hb_000250_060 Hb_000250_060 Hb_010812_120--Hb_000250_060 Hb_000016_160 Hb_000016_160 Hb_010812_120--Hb_000016_160 Hb_003994_260 Hb_003994_260 Hb_010812_120--Hb_003994_260 Hb_004837_160 Hb_004837_160 Hb_003349_090--Hb_004837_160 Hb_028515_010 Hb_028515_010 Hb_003349_090--Hb_028515_010 Hb_000373_130 Hb_000373_130 Hb_003349_090--Hb_000373_130 Hb_004889_010 Hb_004889_010 Hb_003349_090--Hb_004889_010 Hb_003349_090--Hb_089032_030 Hb_001633_210--Hb_000250_060 Hb_000840_250 Hb_000840_250 Hb_001633_210--Hb_000840_250 Hb_000614_250 Hb_000614_250 Hb_001633_210--Hb_000614_250 Hb_000185_030 Hb_000185_030 Hb_001633_210--Hb_000185_030 Hb_000297_010 Hb_000297_010 Hb_001633_210--Hb_000297_010 Hb_003502_060 Hb_003502_060 Hb_089032_030--Hb_003502_060 Hb_009615_070 Hb_009615_070 Hb_089032_030--Hb_009615_070 Hb_010423_030 Hb_010423_030 Hb_089032_030--Hb_010423_030 Hb_001545_170 Hb_001545_170 Hb_089032_030--Hb_001545_170 Hb_005539_280 Hb_005539_280 Hb_000250_060--Hb_005539_280 Hb_001726_020 Hb_001726_020 Hb_000250_060--Hb_001726_020 Hb_000250_060--Hb_000297_010 Hb_002046_180 Hb_002046_180 Hb_000250_060--Hb_002046_180 Hb_004102_110 Hb_004102_110 Hb_000016_160--Hb_004102_110 Hb_000016_160--Hb_028515_010 Hb_003697_040 Hb_003697_040 Hb_000016_160--Hb_003697_040 Hb_003605_090 Hb_003605_090 Hb_000016_160--Hb_003605_090 Hb_000120_020 Hb_000120_020 Hb_000016_160--Hb_000120_020 Hb_000069_420 Hb_000069_420 Hb_003994_260--Hb_000069_420 Hb_000483_260 Hb_000483_260 Hb_003994_260--Hb_000483_260 Hb_000258_260 Hb_000258_260 Hb_003994_260--Hb_000258_260 Hb_004324_090 Hb_004324_090 Hb_003994_260--Hb_004324_090 Hb_000603_080 Hb_000603_080 Hb_003994_260--Hb_000603_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.35386 12.8754 12.5514 15.4279 9.27164 13.986
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
16.07 29.2512 25.9008 16.2186 11.4541

CAGE analysis