Hb_010813_030

Information

Type -
Description -
Location Contig10813: 35996-50456
Sequence    

Annotation

kegg
ID rcu:RCOM_0951470
description aldehyde oxidase, putative (EC:1.2.3.1)
nr
ID XP_012066305.1
description PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
swissprot
ID Q7G192
description Indole-3-acetaldehyde oxidase OS=Arabidopsis thaliana GN=AAO2 PE=1 SV=2
trembl
ID B9RQ18
description Aldehyde oxidase, putative OS=Ricinus communis GN=RCOM_0951470 PE=4 SV=1
Gene Ontology
ID GO:0004031
description abscisic-aldehyde oxidase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02513: 36127-43429 , PASA_asmbl_02515: 44072-45402 , PASA_asmbl_02516: 46221-48431 , PASA_asmbl_02517: 48463-50429
cDNA
(Sanger)
(ID:Location)		 051_E12.ab1: 49507-50420 , 052_E12.ab1: 50237-50399

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010813_030 0.0 - - PREDICTED: indole-3-acetaldehyde oxidase-like [Jatropha curcas]
2 Hb_018212_020 0.0771883789 - - PREDICTED: uncharacterized protein LOC105636321 [Jatropha curcas]
3 Hb_000254_150 0.0981400292 - - PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
4 Hb_000876_050 0.1074223378 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like [Jatropha curcas]
5 Hb_006326_030 0.1119454482 - - conserved hypothetical protein [Ricinus communis]
6 Hb_132515_010 0.1236174674 - - phosphoprotein phosphatase, putative [Ricinus communis]
7 Hb_001675_130 0.1289357905 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein GLABRA 2 [Jatropha curcas]
8 Hb_002997_050 0.1351358414 - - PREDICTED: receptor-like protein 12 isoform X4 [Populus euphratica]
9 Hb_000684_010 0.1377979455 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
10 Hb_001611_010 0.1383321915 - - scab resistance family protein [Populus trichocarpa]
11 Hb_006569_110 0.1449328851 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005618_110 0.1485684748 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_064482_010 0.15042314 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_000120_980 0.1525398208 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 5-like [Jatropha curcas]
15 Hb_000221_170 0.1529505135 - - PREDICTED: alcohol dehydrogenase-like 2 [Jatropha curcas]
16 Hb_054865_030 0.1538448055 - - -
17 Hb_005542_110 0.1541975671 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_01203 [Jatropha curcas]
18 Hb_011174_100 0.1557138096 - - ubiquitin-protein ligase, putative [Ricinus communis]
19 Hb_003767_010 0.1561803874 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Jatropha curcas]
20 Hb_000685_040 0.159214411 - - hypothetical protein OsJ_17676 [Oryza sativa Japonica Group]

Gene co-expression network

sample Hb_010813_030 Hb_010813_030 Hb_018212_020 Hb_018212_020 Hb_010813_030--Hb_018212_020 Hb_000254_150 Hb_000254_150 Hb_010813_030--Hb_000254_150 Hb_000876_050 Hb_000876_050 Hb_010813_030--Hb_000876_050 Hb_006326_030 Hb_006326_030 Hb_010813_030--Hb_006326_030 Hb_132515_010 Hb_132515_010 Hb_010813_030--Hb_132515_010 Hb_001675_130 Hb_001675_130 Hb_010813_030--Hb_001675_130 Hb_018212_020--Hb_000254_150 Hb_018212_020--Hb_132515_010 Hb_018212_020--Hb_006326_030 Hb_006569_110 Hb_006569_110 Hb_018212_020--Hb_006569_110 Hb_002997_050 Hb_002997_050 Hb_018212_020--Hb_002997_050 Hb_000254_150--Hb_006569_110 Hb_005618_110 Hb_005618_110 Hb_000254_150--Hb_005618_110 Hb_000254_150--Hb_001675_130 Hb_006938_010 Hb_006938_010 Hb_000254_150--Hb_006938_010 Hb_000221_170 Hb_000221_170 Hb_000876_050--Hb_000221_170 Hb_000684_010 Hb_000684_010 Hb_000876_050--Hb_000684_010 Hb_005333_100 Hb_005333_100 Hb_000876_050--Hb_005333_100 Hb_000120_980 Hb_000120_980 Hb_000876_050--Hb_000120_980 Hb_005542_110 Hb_005542_110 Hb_000876_050--Hb_005542_110 Hb_006326_030--Hb_132515_010 Hb_000286_190 Hb_000286_190 Hb_006326_030--Hb_000286_190 Hb_000920_360 Hb_000920_360 Hb_006326_030--Hb_000920_360 Hb_006326_030--Hb_000876_050 Hb_054865_030 Hb_054865_030 Hb_132515_010--Hb_054865_030 Hb_064482_010 Hb_064482_010 Hb_132515_010--Hb_064482_010 Hb_000740_130 Hb_000740_130 Hb_132515_010--Hb_000740_130 Hb_003060_080 Hb_003060_080 Hb_132515_010--Hb_003060_080 Hb_007919_030 Hb_007919_030 Hb_001675_130--Hb_007919_030 Hb_001675_130--Hb_000684_010 Hb_003767_010 Hb_003767_010 Hb_001675_130--Hb_003767_010 Hb_000649_280 Hb_000649_280 Hb_001675_130--Hb_000649_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0083907 33.8844 2.33012 3.97889 0.0560434 0.0371757
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.00950028 0.0224297 0.0143803 43.8225 22.001

CAGE analysis