Hb_010839_010

Information

Type -
Description -
Location Contig10839: 15857-25238
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable lrr receptor-like serine threonine-protein kinase at3g47570

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010839_010 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_004128_090 0.0687542608 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
3 Hb_004010_090 0.0733901085 - - ATP binding protein, putative [Ricinus communis]
4 Hb_009812_010 0.0802689827 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_029576_080 0.0838758461 - - Aspartic proteinase precursor, putative [Ricinus communis]
6 Hb_000011_120 0.0868906057 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
7 Hb_005116_010 0.0927838257 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
8 Hb_009150_060 0.0937801742 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
9 Hb_002475_030 0.1031593826 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009627_040 0.1043197299 - - Lipase class 3-related protein, putative [Theobroma cacao]
11 Hb_003085_080 0.1139218673 - - nucleic acid binding protein, putative [Ricinus communis]
12 Hb_001660_050 0.1154115071 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Eucalyptus grandis]
13 Hb_001318_120 0.1187867901 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
14 Hb_004586_110 0.1223480224 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
15 Hb_003842_010 0.1232053816 - - receptor protein kinase, putative [Ricinus communis]
16 Hb_135554_010 0.1240014741 - - Insulin-degrading enzyme, putative [Ricinus communis]
17 Hb_002622_010 0.1246758587 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
18 Hb_005211_090 0.1254551354 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
19 Hb_001329_110 0.1276038668 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
20 Hb_005276_220 0.1284151257 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]

Gene co-expression network

sample Hb_010839_010 Hb_010839_010 Hb_004128_090 Hb_004128_090 Hb_010839_010--Hb_004128_090 Hb_004010_090 Hb_004010_090 Hb_010839_010--Hb_004010_090 Hb_009812_010 Hb_009812_010 Hb_010839_010--Hb_009812_010 Hb_029576_080 Hb_029576_080 Hb_010839_010--Hb_029576_080 Hb_000011_120 Hb_000011_120 Hb_010839_010--Hb_000011_120 Hb_005116_010 Hb_005116_010 Hb_010839_010--Hb_005116_010 Hb_004128_090--Hb_004010_090 Hb_002475_030 Hb_002475_030 Hb_004128_090--Hb_002475_030 Hb_009150_060 Hb_009150_060 Hb_004128_090--Hb_009150_060 Hb_003085_080 Hb_003085_080 Hb_004128_090--Hb_003085_080 Hb_004128_090--Hb_009812_010 Hb_004010_090--Hb_002475_030 Hb_004010_090--Hb_009150_060 Hb_004010_090--Hb_009812_010 Hb_001514_070 Hb_001514_070 Hb_004010_090--Hb_001514_070 Hb_009812_010--Hb_005116_010 Hb_004586_110 Hb_004586_110 Hb_009812_010--Hb_004586_110 Hb_010334_040 Hb_010334_040 Hb_009812_010--Hb_010334_040 Hb_001660_050 Hb_001660_050 Hb_029576_080--Hb_001660_050 Hb_000917_120 Hb_000917_120 Hb_029576_080--Hb_000917_120 Hb_009659_040 Hb_009659_040 Hb_029576_080--Hb_009659_040 Hb_029576_080--Hb_000011_120 Hb_170878_050 Hb_170878_050 Hb_029576_080--Hb_170878_050 Hb_001329_110 Hb_001329_110 Hb_000011_120--Hb_001329_110 Hb_009627_040 Hb_009627_040 Hb_000011_120--Hb_009627_040 Hb_175758_010 Hb_175758_010 Hb_000011_120--Hb_175758_010 Hb_005211_090 Hb_005211_090 Hb_000011_120--Hb_005211_090 Hb_001318_120 Hb_001318_120 Hb_000011_120--Hb_001318_120 Hb_005116_010--Hb_010334_040 Hb_005010_040 Hb_005010_040 Hb_005116_010--Hb_005010_040 Hb_005116_010--Hb_009627_040 Hb_005116_010--Hb_005211_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0914284 0.083047 0.0783042 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.351924 0.12006

CAGE analysis