Hb_010863_020

Information

Type -
Description -
Location Contig10863: 14007-17707
Sequence    

Annotation

kegg
ID rcu:RCOM_0555410
description protein binding protein, putative
nr
ID XP_012082688.1
description PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
swissprot
ID Q9SA69
description BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana GN=At1g03010 PE=2 SV=1
trembl
ID B9S3V0
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_0555410 PE=4 SV=1
Gene Ontology
ID GO:0005515
description btb poz domain-containing protein at1g03010 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02615: 15497-17904
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010863_020 0.0 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
2 Hb_013399_060 0.0665497117 - - PREDICTED: uncharacterized protein LOC105133408 [Populus euphratica]
3 Hb_001257_140 0.0690763769 - - Gb:AAF02129.1, putative [Theobroma cacao]
4 Hb_003858_070 0.0805090672 - - PREDICTED: uncharacterized protein LOC105647879 [Jatropha curcas]
5 Hb_001296_010 0.0819028003 - - conserved hypothetical protein [Ricinus communis]
6 Hb_011344_050 0.0821463838 - - PREDICTED: 21 kDa protein [Jatropha curcas]
7 Hb_001006_300 0.0966731632 - - lipid binding protein, putative [Ricinus communis]
8 Hb_003849_170 0.1014888578 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
9 Hb_005144_150 0.1016820959 - - hypothetical protein VITISV_013572 [Vitis vinifera]
10 Hb_000991_060 0.1032371012 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
11 Hb_008731_010 0.1041709074 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
12 Hb_019299_020 0.1045426769 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
13 Hb_180088_010 0.1050072627 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_004757_010 0.1092209562 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
15 Hb_170077_020 0.1099501138 - - PREDICTED: probable serine incorporator [Jatropha curcas]
16 Hb_009421_060 0.1103261374 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
17 Hb_000344_030 0.11161949 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
18 Hb_135757_030 0.111935313 - - PREDICTED: actin-depolymerizing factor 5 [Jatropha curcas]
19 Hb_000352_360 0.112381279 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
20 Hb_003607_080 0.112633571 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]

Gene co-expression network

sample Hb_010863_020 Hb_010863_020 Hb_013399_060 Hb_013399_060 Hb_010863_020--Hb_013399_060 Hb_001257_140 Hb_001257_140 Hb_010863_020--Hb_001257_140 Hb_003858_070 Hb_003858_070 Hb_010863_020--Hb_003858_070 Hb_001296_010 Hb_001296_010 Hb_010863_020--Hb_001296_010 Hb_011344_050 Hb_011344_050 Hb_010863_020--Hb_011344_050 Hb_001006_300 Hb_001006_300 Hb_010863_020--Hb_001006_300 Hb_013399_060--Hb_003858_070 Hb_013399_060--Hb_001006_300 Hb_003598_050 Hb_003598_050 Hb_013399_060--Hb_003598_050 Hb_180088_010 Hb_180088_010 Hb_013399_060--Hb_180088_010 Hb_013399_060--Hb_001296_010 Hb_005144_150 Hb_005144_150 Hb_001257_140--Hb_005144_150 Hb_003849_170 Hb_003849_170 Hb_001257_140--Hb_003849_170 Hb_000352_360 Hb_000352_360 Hb_001257_140--Hb_000352_360 Hb_170077_020 Hb_170077_020 Hb_001257_140--Hb_170077_020 Hb_001257_140--Hb_003858_070 Hb_003858_070--Hb_001006_300 Hb_017061_010 Hb_017061_010 Hb_003858_070--Hb_017061_010 Hb_003858_070--Hb_005144_150 Hb_003858_070--Hb_180088_010 Hb_001296_010--Hb_011344_050 Hb_000991_060 Hb_000991_060 Hb_001296_010--Hb_000991_060 Hb_002030_190 Hb_002030_190 Hb_001296_010--Hb_002030_190 Hb_027411_030 Hb_027411_030 Hb_001296_010--Hb_027411_030 Hb_004757_010 Hb_004757_010 Hb_011344_050--Hb_004757_010 Hb_011344_050--Hb_027411_030 Hb_006618_100 Hb_006618_100 Hb_011344_050--Hb_006618_100 Hb_011344_050--Hb_013399_060 Hb_001006_300--Hb_017061_010 Hb_001898_030 Hb_001898_030 Hb_001006_300--Hb_001898_030 Hb_000964_120 Hb_000964_120 Hb_001006_300--Hb_000964_120 Hb_001006_300--Hb_005144_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0832505 1.55419 1.77574 19.4288 0.0574079 0.0194692
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.17186 2.21366

CAGE analysis