Hb_010863_040

Information

Type -
Description -
Location Contig10863: 22233-29900
Sequence    

Annotation

kegg
ID rcu:RCOM_0555550
description glutaredoxin, grx, putative
nr
ID XP_012082683.1
description PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
swissprot
ID Q9LYC8
description Monothiol glutaredoxin-S6 OS=Arabidopsis thaliana GN=GRXS6 PE=3 SV=1
trembl
ID A0A067JW19
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13868 PE=4 SV=1
Gene Ontology
ID GO:0009055
description monothiol glutaredoxin-s6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010863_040 0.0 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
2 Hb_002835_130 0.0131232603 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
3 Hb_000069_080 0.0235280703 - - PREDICTED: laccase-6 [Jatropha curcas]
4 Hb_002710_020 0.1534701814 - - -
5 Hb_007694_030 0.1536716604 - - hypothetical protein SORBIDRAFT_04g037485 [Sorghum bicolor]
6 Hb_004800_110 0.1592496811 - - PREDICTED: proline-rich receptor-like protein kinase PERK4 [Jatropha curcas]
7 Hb_000224_110 0.2316135893 - - -
8 Hb_003811_010 0.2590299456 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
9 Hb_002485_020 0.2675645447 - - metal transport family protein [Populus trichocarpa]
10 Hb_001825_050 0.2741423142 - - -
11 Hb_004453_200 0.3041894547 - - Boron transporter, putative [Ricinus communis]
12 Hb_151497_010 0.3057683963 - - -
13 Hb_000982_040 0.3330153108 - - conserved hypothetical protein [Ricinus communis]
14 Hb_002120_020 0.3612486299 - - hypothetical protein JCGZ_18787 [Jatropha curcas]
15 Hb_184484_010 0.3614481747 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
16 Hb_038005_010 0.3614615608 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
17 Hb_027846_010 0.3618523466 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
18 Hb_007101_220 0.3656499645 - - Gibberellin-regulated protein 3 precursor, putative [Ricinus communis]
19 Hb_181476_010 0.3663624146 - - -
20 Hb_004117_300 0.3682719476 - - -

Gene co-expression network

sample Hb_010863_040 Hb_010863_040 Hb_002835_130 Hb_002835_130 Hb_010863_040--Hb_002835_130 Hb_000069_080 Hb_000069_080 Hb_010863_040--Hb_000069_080 Hb_002710_020 Hb_002710_020 Hb_010863_040--Hb_002710_020 Hb_007694_030 Hb_007694_030 Hb_010863_040--Hb_007694_030 Hb_004800_110 Hb_004800_110 Hb_010863_040--Hb_004800_110 Hb_000224_110 Hb_000224_110 Hb_010863_040--Hb_000224_110 Hb_002835_130--Hb_000069_080 Hb_002835_130--Hb_007694_030 Hb_002835_130--Hb_002710_020 Hb_002835_130--Hb_004800_110 Hb_002835_130--Hb_000224_110 Hb_000069_080--Hb_002710_020 Hb_000069_080--Hb_007694_030 Hb_000069_080--Hb_004800_110 Hb_000069_080--Hb_000224_110 Hb_002710_020--Hb_004800_110 Hb_002710_020--Hb_007694_030 Hb_003811_010 Hb_003811_010 Hb_002710_020--Hb_003811_010 Hb_002485_020 Hb_002485_020 Hb_002710_020--Hb_002485_020 Hb_007694_030--Hb_004800_110 Hb_001825_050 Hb_001825_050 Hb_007694_030--Hb_001825_050 Hb_007694_030--Hb_003811_010 Hb_004800_110--Hb_003811_010 Hb_004800_110--Hb_002485_020 Hb_000224_110--Hb_001825_050 Hb_000224_110--Hb_007694_030 Hb_000224_110--Hb_002710_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0403581 0 0.0494919 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0799062 0

CAGE analysis