Hb_010883_200

Information

Type -
Description -
Location Contig10883: 156181-157665
Sequence    

Annotation

kegg
ID rcu:RCOM_1031440
description flavonol synthase, putative (EC:1.14.11.23)
nr
ID XP_012078184.1
description PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
swissprot
ID Q07512
description Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1
trembl
ID A0A067KCQ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12060 PE=3 SV=1
Gene Ontology
ID GO:0045431
description flavonol synthase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02680: 158291-161020
cDNA
(Sanger)
(ID:Location)		 001_L17.ab1: 158389-161020 , 005_O02.ab1: 158389-161020 , 009_G18.ab1: 158389-161020 , 018_J10.ab1: 158389-161020 , 018_N22.ab1: 158391-161016 , 022_E24.ab1: 158324-160969 , 024_N23.ab1: 158324-160969 , 026_H19.ab1: 158389-161020 , 027_H13.ab1: 158389-161020 , 040_D08.ab1: 158381-161020 , 043_P21.ab1: 158389-160982 , 045_J17.ab1: 158381-161020 , 048_O18.ab1: 158389-161020 , 051_B16.ab1: 158407-161020 , 051_M02.ab1: 158389-161020 , 053_A19.ab1: 158389-161020

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010883_200 0.0 - - PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Jatropha curcas]
2 Hb_000010_240 0.1491935034 - - Protein bem46, putative [Ricinus communis]
3 Hb_004109_040 0.1699413915 - - PREDICTED: pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Jatropha curcas]
4 Hb_002974_040 0.1745125364 - - GRF zinc finger containing protein [Medicago truncatula]
5 Hb_002681_060 0.1752611426 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 8 [Jatropha curcas]
6 Hb_000983_090 0.1810236423 - - PREDICTED: mitogen-activated protein kinase homolog NTF3 [Jatropha curcas]
7 Hb_001477_070 0.1816938301 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000318_190 0.1821258763 - - hypothetical protein JCGZ_04889 [Jatropha curcas]
9 Hb_000407_040 0.1866281021 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
10 Hb_000856_190 0.1867662974 - - PREDICTED: dnaJ homolog subfamily B member 1 [Jatropha curcas]
11 Hb_004375_080 0.1898672063 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
12 Hb_000866_280 0.1905610346 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
13 Hb_002631_320 0.1925312788 - - hypothetical protein JCGZ_22628 [Jatropha curcas]
14 Hb_004204_170 0.1927374304 - - synaptosomal associated protein, putative [Ricinus communis]
15 Hb_001645_140 0.1936563101 - - PREDICTED: AT-hook motif nuclear-localized protein 13-like [Jatropha curcas]
16 Hb_000059_340 0.1957029022 transcription factor TF Family: SOH1 uncharacterized protein LOC100527879 [Glycine max]
17 Hb_000085_100 0.1965054988 - - PREDICTED: protein HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN 5 [Jatropha curcas]
18 Hb_000256_140 0.1984394877 - - PREDICTED: uncharacterized protein LOC105637585 isoform X1 [Jatropha curcas]
19 Hb_000363_210 0.1988190065 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
20 Hb_002411_030 0.1992660057 transcription factor TF Family: NF-YC PREDICTED: dr1-associated corepressor homolog [Jatropha curcas]

Gene co-expression network

sample Hb_010883_200 Hb_010883_200 Hb_000010_240 Hb_000010_240 Hb_010883_200--Hb_000010_240 Hb_004109_040 Hb_004109_040 Hb_010883_200--Hb_004109_040 Hb_002974_040 Hb_002974_040 Hb_010883_200--Hb_002974_040 Hb_002681_060 Hb_002681_060 Hb_010883_200--Hb_002681_060 Hb_000983_090 Hb_000983_090 Hb_010883_200--Hb_000983_090 Hb_001477_070 Hb_001477_070 Hb_010883_200--Hb_001477_070 Hb_000407_040 Hb_000407_040 Hb_000010_240--Hb_000407_040 Hb_005488_140 Hb_005488_140 Hb_000010_240--Hb_005488_140 Hb_004800_250 Hb_004800_250 Hb_000010_240--Hb_004800_250 Hb_000059_340 Hb_000059_340 Hb_000010_240--Hb_000059_340 Hb_000061_470 Hb_000061_470 Hb_000010_240--Hb_000061_470 Hb_000010_240--Hb_000983_090 Hb_002411_030 Hb_002411_030 Hb_004109_040--Hb_002411_030 Hb_004109_040--Hb_000983_090 Hb_000856_190 Hb_000856_190 Hb_004109_040--Hb_000856_190 Hb_007813_040 Hb_007813_040 Hb_004109_040--Hb_007813_040 Hb_029799_010 Hb_029799_010 Hb_004109_040--Hb_029799_010 Hb_000010_400 Hb_000010_400 Hb_004109_040--Hb_000010_400 Hb_004204_050 Hb_004204_050 Hb_002974_040--Hb_004204_050 Hb_002631_320 Hb_002631_320 Hb_002974_040--Hb_002631_320 Hb_000866_280 Hb_000866_280 Hb_002974_040--Hb_000866_280 Hb_000256_140 Hb_000256_140 Hb_002974_040--Hb_000256_140 Hb_001645_140 Hb_001645_140 Hb_002974_040--Hb_001645_140 Hb_002681_060--Hb_000407_040 Hb_000130_380 Hb_000130_380 Hb_002681_060--Hb_000130_380 Hb_002681_060--Hb_000061_470 Hb_002681_060--Hb_001477_070 Hb_002681_060--Hb_000059_340 Hb_002681_060--Hb_000010_240 Hb_000983_090--Hb_000856_190 Hb_000983_090--Hb_002411_030 Hb_012762_030 Hb_012762_030 Hb_000983_090--Hb_012762_030 Hb_004204_170 Hb_004204_170 Hb_000983_090--Hb_004204_170 Hb_012055_060 Hb_012055_060 Hb_000983_090--Hb_012055_060 Hb_000331_670 Hb_000331_670 Hb_000983_090--Hb_000331_670 Hb_000084_030 Hb_000084_030 Hb_001477_070--Hb_000084_030 Hb_008695_090 Hb_008695_090 Hb_001477_070--Hb_008695_090 Hb_001477_070--Hb_000407_040 Hb_008103_110 Hb_008103_110 Hb_001477_070--Hb_008103_110 Hb_014361_150 Hb_014361_150 Hb_001477_070--Hb_014361_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.439266 0.716279 0.719564 0.108644 0.300575 0.333445
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.305579 0.40056 0.73709 0.354419 0

CAGE analysis