Hb_010921_090

Information

Type -
Description -
Location Contig10921: 84191-87965
Sequence    

Annotation

kegg
ID cic:CICLE_v10014076mg
description hypothetical protein
nr
ID KDP38157.1
description hypothetical protein JCGZ_04800 [Jatropha curcas]
swissprot
ID F4IAT2
description THO complex subunit 2 OS=Arabidopsis thaliana GN=THO2 PE=1 SV=1
trembl
ID A0A067KPU6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04800 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010921_090 0.0 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
2 Hb_011861_110 0.1789183868 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
3 Hb_000610_020 0.2189509566 - - unknown [Glycine max]
4 Hb_001486_150 0.2196876277 - - -
5 Hb_004007_120 0.2318224453 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform X1 [Populus euphratica]
6 Hb_004162_010 0.2371399769 - - conserved hypothetical protein [Ricinus communis]
7 Hb_073096_010 0.2377278 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 45-like [Jatropha curcas]
8 Hb_000359_320 0.2387049095 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-4a-like [Jatropha curcas]
9 Hb_007773_030 0.2397945758 - - -
10 Hb_000720_110 0.2400622285 - - hypothetical protein JCGZ_20628 [Jatropha curcas]
11 Hb_004286_030 0.2407800493 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor ANT [Jatropha curcas]
12 Hb_010578_050 0.2432341558 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
13 Hb_147996_010 0.2456111105 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
14 Hb_000223_050 0.2487230586 - - PREDICTED: endochitinase A-like [Jatropha curcas]
15 Hb_005186_090 0.2505166752 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_002783_320 0.2523803487 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FC isoform X1 [Jatropha curcas]
17 Hb_000914_130 0.2537819821 - - copper-transporting atpase p-type, putative [Ricinus communis]
18 Hb_006615_040 0.2539832709 - - monoxygenase, putative [Ricinus communis]
19 Hb_009775_040 0.2550792045 - - PREDICTED: probable glutathione S-transferase parC [Vitis vinifera]
20 Hb_000692_180 0.25598103 - - PREDICTED: uncharacterized protein At1g76070 [Jatropha curcas]

Gene co-expression network

sample Hb_010921_090 Hb_010921_090 Hb_011861_110 Hb_011861_110 Hb_010921_090--Hb_011861_110 Hb_000610_020 Hb_000610_020 Hb_010921_090--Hb_000610_020 Hb_001486_150 Hb_001486_150 Hb_010921_090--Hb_001486_150 Hb_004007_120 Hb_004007_120 Hb_010921_090--Hb_004007_120 Hb_004162_010 Hb_004162_010 Hb_010921_090--Hb_004162_010 Hb_073096_010 Hb_073096_010 Hb_010921_090--Hb_073096_010 Hb_002461_080 Hb_002461_080 Hb_011861_110--Hb_002461_080 Hb_133636_010 Hb_133636_010 Hb_011861_110--Hb_133636_010 Hb_000088_160 Hb_000088_160 Hb_011861_110--Hb_000088_160 Hb_007773_030 Hb_007773_030 Hb_011861_110--Hb_007773_030 Hb_002783_320 Hb_002783_320 Hb_011861_110--Hb_002783_320 Hb_147996_010 Hb_147996_010 Hb_000610_020--Hb_147996_010 Hb_000787_190 Hb_000787_190 Hb_000610_020--Hb_000787_190 Hb_001584_010 Hb_001584_010 Hb_000610_020--Hb_001584_010 Hb_002553_160 Hb_002553_160 Hb_000610_020--Hb_002553_160 Hb_000130_060 Hb_000130_060 Hb_000610_020--Hb_000130_060 Hb_000960_070 Hb_000960_070 Hb_001486_150--Hb_000960_070 Hb_000111_300 Hb_000111_300 Hb_001486_150--Hb_000111_300 Hb_000069_090 Hb_000069_090 Hb_001486_150--Hb_000069_090 Hb_001863_100 Hb_001863_100 Hb_001486_150--Hb_001863_100 Hb_001486_150--Hb_133636_010 Hb_000977_090 Hb_000977_090 Hb_004007_120--Hb_000977_090 Hb_000120_070 Hb_000120_070 Hb_004007_120--Hb_000120_070 Hb_000914_130 Hb_000914_130 Hb_004007_120--Hb_000914_130 Hb_004218_160 Hb_004218_160 Hb_004007_120--Hb_004218_160 Hb_003556_070 Hb_003556_070 Hb_004007_120--Hb_003556_070 Hb_005649_010 Hb_005649_010 Hb_004007_120--Hb_005649_010 Hb_001623_090 Hb_001623_090 Hb_004162_010--Hb_001623_090 Hb_003185_090 Hb_003185_090 Hb_004162_010--Hb_003185_090 Hb_002027_310 Hb_002027_310 Hb_004162_010--Hb_002027_310 Hb_004657_040 Hb_004657_040 Hb_004162_010--Hb_004657_040 Hb_004286_030 Hb_004286_030 Hb_004162_010--Hb_004286_030 Hb_001131_070 Hb_001131_070 Hb_073096_010--Hb_001131_070 Hb_000699_190 Hb_000699_190 Hb_073096_010--Hb_000699_190 Hb_073096_010--Hb_002461_080 Hb_008554_010 Hb_008554_010 Hb_073096_010--Hb_008554_010 Hb_000181_450 Hb_000181_450 Hb_073096_010--Hb_000181_450 Hb_000221_070 Hb_000221_070 Hb_073096_010--Hb_000221_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.171868 0.0700314 0.0423416 0 0.0303414
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0206682 0 0.131749 0

CAGE analysis