Hb_010931_130

Information

Type -
Description -
Location Contig10931: 104075-111138
Sequence    

Annotation

kegg
ID rcu:RCOM_0614030
description big map kinase/bmk, putative (EC:2.7.11.24)
nr
ID XP_012077899.1
description PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
swissprot
ID Q9SJG9
description Mitogen-activated protein kinase 20 OS=Arabidopsis thaliana GN=MPK20 PE=1 SV=2
trembl
ID A0A067KA08
description Mitogen-activated protein kinase OS=Jatropha curcas GN=JCGZ_13613 PE=4 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase 20

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02835: 104121-113520 , PASA_asmbl_02839: 108630-108884 , PASA_asmbl_02842: 105490-105917 , PASA_asmbl_02844: 111852-112052
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010931_130 0.0 - - PREDICTED: mitogen-activated protein kinase 20 [Jatropha curcas]
2 Hb_000375_350 0.0725821707 - - PREDICTED: uncharacterized protein LOC105641632 [Jatropha curcas]
3 Hb_000925_130 0.0779451768 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At3g05675-like isoform X2 [Jatropha curcas]
4 Hb_003052_050 0.0796690499 - - PREDICTED: LAG1 longevity assurance homolog 3 [Jatropha curcas]
5 Hb_004754_050 0.0820204509 - - PREDICTED: uncharacterized protein LOC104433925 [Eucalyptus grandis]
6 Hb_023371_020 0.0829220718 - - PREDICTED: uncharacterized protein LOC105633512 [Jatropha curcas]
7 Hb_000599_250 0.0829535756 - - hypothetical protein POPTR_0002s03730g [Populus trichocarpa]
8 Hb_004109_220 0.0839329827 - - PREDICTED: polyadenylate-binding protein-interacting protein 9-like [Populus euphratica]
9 Hb_000288_030 0.0840373937 - - PREDICTED: syntaxin-32 [Jatropha curcas]
10 Hb_006478_020 0.0846236117 - - PREDICTED: putative nuclease HARBI1 [Jatropha curcas]
11 Hb_133702_010 0.0853944059 - - PREDICTED: reticulon-4-interacting protein 1, mitochondrial isoform X1 [Jatropha curcas]
12 Hb_000928_070 0.0858328773 - - PREDICTED: maltose excess protein 1, chloroplastic-like [Jatropha curcas]
13 Hb_007975_060 0.0860559599 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
14 Hb_008246_060 0.0880751126 - - hypothetical protein F383_01577 [Gossypium arboreum]
15 Hb_000345_310 0.0892179953 - - PREDICTED: sucrose nonfermenting 4-like protein isoform X3 [Jatropha curcas]
16 Hb_175557_010 0.0895690848 - - glutamate-1-semialdehyde 2,1-aminomutase, putative [Ricinus communis]
17 Hb_003025_100 0.0897528996 - - PREDICTED: serine/threonine-protein phosphatase 5 isoform X2 [Jatropha curcas]
18 Hb_005167_010 0.0897623064 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
19 Hb_001300_150 0.0899366077 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
20 Hb_002600_090 0.0916624884 - - ATP binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_010931_130 Hb_010931_130 Hb_000375_350 Hb_000375_350 Hb_010931_130--Hb_000375_350 Hb_000925_130 Hb_000925_130 Hb_010931_130--Hb_000925_130 Hb_003052_050 Hb_003052_050 Hb_010931_130--Hb_003052_050 Hb_004754_050 Hb_004754_050 Hb_010931_130--Hb_004754_050 Hb_023371_020 Hb_023371_020 Hb_010931_130--Hb_023371_020 Hb_000599_250 Hb_000599_250 Hb_010931_130--Hb_000599_250 Hb_017895_040 Hb_017895_040 Hb_000375_350--Hb_017895_040 Hb_001300_150 Hb_001300_150 Hb_000375_350--Hb_001300_150 Hb_000375_350--Hb_000599_250 Hb_005496_140 Hb_005496_140 Hb_000375_350--Hb_005496_140 Hb_002641_060 Hb_002641_060 Hb_000375_350--Hb_002641_060 Hb_013575_010 Hb_013575_010 Hb_000375_350--Hb_013575_010 Hb_000288_030 Hb_000288_030 Hb_000925_130--Hb_000288_030 Hb_013358_040 Hb_013358_040 Hb_000925_130--Hb_013358_040 Hb_000928_070 Hb_000928_070 Hb_000925_130--Hb_000928_070 Hb_000349_260 Hb_000349_260 Hb_000925_130--Hb_000349_260 Hb_000345_310 Hb_000345_310 Hb_000925_130--Hb_000345_310 Hb_000925_130--Hb_000375_350 Hb_001514_120 Hb_001514_120 Hb_003052_050--Hb_001514_120 Hb_005167_010 Hb_005167_010 Hb_003052_050--Hb_005167_010 Hb_012799_170 Hb_012799_170 Hb_003052_050--Hb_012799_170 Hb_001541_120 Hb_001541_120 Hb_003052_050--Hb_001541_120 Hb_007975_060 Hb_007975_060 Hb_003052_050--Hb_007975_060 Hb_004754_050--Hb_007975_060 Hb_002157_120 Hb_002157_120 Hb_004754_050--Hb_002157_120 Hb_019181_040 Hb_019181_040 Hb_004754_050--Hb_019181_040 Hb_133702_010 Hb_133702_010 Hb_004754_050--Hb_133702_010 Hb_001087_030 Hb_001087_030 Hb_004754_050--Hb_001087_030 Hb_000058_130 Hb_000058_130 Hb_004754_050--Hb_000058_130 Hb_003878_090 Hb_003878_090 Hb_023371_020--Hb_003878_090 Hb_001141_420 Hb_001141_420 Hb_023371_020--Hb_001141_420 Hb_004545_110 Hb_004545_110 Hb_023371_020--Hb_004545_110 Hb_004157_050 Hb_004157_050 Hb_023371_020--Hb_004157_050 Hb_023371_020--Hb_133702_010 Hb_000260_350 Hb_000260_350 Hb_023371_020--Hb_000260_350 Hb_004934_100 Hb_004934_100 Hb_000599_250--Hb_004934_100 Hb_001711_020 Hb_001711_020 Hb_000599_250--Hb_001711_020 Hb_000599_250--Hb_001300_150 Hb_000599_250--Hb_005496_140 Hb_000599_250--Hb_002641_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.626 12.6031 24.1289 35.6108 18.9194 14.9289
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
27.6654 27.4194 31.8135 15.2246 30.1511

CAGE analysis