Hb_010964_010

Information

Type -
Description -
Location Contig10964: 13349-13995
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010964_010 0.0 - - -
2 Hb_001999_170 0.1011333895 - - PREDICTED: uncharacterized protein LOC105630609 [Jatropha curcas]
3 Hb_007858_020 0.1055737279 - - PREDICTED: probable protein phosphatase 2C 25 [Jatropha curcas]
4 Hb_000808_090 0.111942559 - - PREDICTED: uncharacterized protein LOC105647449 [Jatropha curcas]
5 Hb_001310_010 0.1140336716 - - PREDICTED: calcium-transporting ATPase 2, plasma membrane-type [Jatropha curcas]
6 Hb_000627_130 0.1178875052 - - Polcalcin Jun o, putative [Ricinus communis]
7 Hb_001619_140 0.1214582173 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
8 Hb_000340_060 0.1225185408 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005054_330 0.1233341394 - - PREDICTED: nematode resistance protein-like HSPRO2 [Jatropha curcas]
10 Hb_004032_220 0.1247914408 - - Calmodulin, putative [Ricinus communis]
11 Hb_000571_030 0.1263437435 - - ammonium transporter, putative [Ricinus communis]
12 Hb_124953_010 0.1280195574 - - hypothetical protein RCOM_1314600 [Ricinus communis]
13 Hb_000032_150 0.1342906999 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
14 Hb_029622_080 0.1355146321 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
15 Hb_000059_260 0.1363087072 - - PREDICTED: LOW QUALITY PROTEIN: peroxidase 60 [Jatropha curcas]
16 Hb_004612_020 0.1367756627 - - PREDICTED: tetraspanin-8-like [Populus euphratica]
17 Hb_167186_010 0.1374491328 - - cation-transporting atpase plant, putative [Ricinus communis]
18 Hb_181810_010 0.137798833 - - hypothetical protein JCGZ_14167 [Jatropha curcas]
19 Hb_120011_010 0.1397234473 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
20 Hb_003207_230 0.1402085517 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]

Gene co-expression network

sample Hb_010964_010 Hb_010964_010 Hb_001999_170 Hb_001999_170 Hb_010964_010--Hb_001999_170 Hb_007858_020 Hb_007858_020 Hb_010964_010--Hb_007858_020 Hb_000808_090 Hb_000808_090 Hb_010964_010--Hb_000808_090 Hb_001310_010 Hb_001310_010 Hb_010964_010--Hb_001310_010 Hb_000627_130 Hb_000627_130 Hb_010964_010--Hb_000627_130 Hb_001619_140 Hb_001619_140 Hb_010964_010--Hb_001619_140 Hb_001999_170--Hb_001310_010 Hb_000336_060 Hb_000336_060 Hb_001999_170--Hb_000336_060 Hb_010126_030 Hb_010126_030 Hb_001999_170--Hb_010126_030 Hb_005054_330 Hb_005054_330 Hb_001999_170--Hb_005054_330 Hb_001999_170--Hb_007858_020 Hb_007858_020--Hb_005054_330 Hb_004032_220 Hb_004032_220 Hb_007858_020--Hb_004032_220 Hb_124953_010 Hb_124953_010 Hb_007858_020--Hb_124953_010 Hb_000959_240 Hb_000959_240 Hb_007858_020--Hb_000959_240 Hb_000032_150 Hb_000032_150 Hb_007858_020--Hb_000032_150 Hb_167186_010 Hb_167186_010 Hb_007858_020--Hb_167186_010 Hb_029622_080 Hb_029622_080 Hb_000808_090--Hb_029622_080 Hb_000665_090 Hb_000665_090 Hb_000808_090--Hb_000665_090 Hb_032260_100 Hb_032260_100 Hb_000808_090--Hb_032260_100 Hb_000656_350 Hb_000656_350 Hb_000808_090--Hb_000656_350 Hb_000808_090--Hb_000627_130 Hb_000808_090--Hb_124953_010 Hb_120011_010 Hb_120011_010 Hb_001310_010--Hb_120011_010 Hb_002960_100 Hb_002960_100 Hb_001310_010--Hb_002960_100 Hb_004612_020 Hb_004612_020 Hb_001310_010--Hb_004612_020 Hb_164146_020 Hb_164146_020 Hb_001310_010--Hb_164146_020 Hb_000627_130--Hb_007858_020 Hb_000627_130--Hb_124953_010 Hb_029664_010 Hb_029664_010 Hb_000627_130--Hb_029664_010 Hb_001153_250 Hb_001153_250 Hb_000627_130--Hb_001153_250 Hb_109591_010 Hb_109591_010 Hb_000627_130--Hb_109591_010 Hb_000627_130--Hb_005054_330 Hb_008202_020 Hb_008202_020 Hb_001619_140--Hb_008202_020 Hb_154466_010 Hb_154466_010 Hb_001619_140--Hb_154466_010 Hb_001619_140--Hb_120011_010 Hb_000571_030 Hb_000571_030 Hb_001619_140--Hb_000571_030 Hb_004899_360 Hb_004899_360 Hb_001619_140--Hb_004899_360 Hb_001619_140--Hb_007858_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.393439 13.9699 8.03464 3.03046 0.163468 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0992499 0 0.205616 0.748162

CAGE analysis