Hb_010964_030

Information

Type -
Description -
Location Contig10964: 34511-36488
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012089575.1
description PREDICTED: uncharacterized protein LOC105647958 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JGI6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00506 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 028_O07r.ab1: 29907-44405

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010964_030 0.0 - - PREDICTED: uncharacterized protein LOC105647958 [Jatropha curcas]
2 Hb_030987_010 0.0272540103 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
3 Hb_000907_050 0.0988506826 - - -
4 Hb_003772_010 0.1322917836 - - polyprotein [Oryza australiensis]
5 Hb_001981_020 0.1375244642 - - PREDICTED: xanthine dehydrogenase 1-like isoform X1 [Populus euphratica]
6 Hb_186580_020 0.142253027 - - PREDICTED: uncharacterized protein LOC103426965 [Malus domestica]
7 Hb_027970_010 0.1422594458 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
8 Hb_002189_020 0.1422778205 - - conserved hypothetical protein [Ricinus communis]
9 Hb_060997_010 0.1422778205 - - PREDICTED: uncharacterized protein LOC105789525 [Gossypium raimondii]
10 Hb_000698_050 0.1423011468 - - -
11 Hb_085603_010 0.1423225668 - - PREDICTED: uncharacterized protein LOC101296995 [Fragaria vesca subsp. vesca]
12 Hb_001821_040 0.1423374876 - - -
13 Hb_062634_010 0.1423829838 - - PREDICTED: uncharacterized protein LOC105636643 [Jatropha curcas]
14 Hb_000832_260 0.1424679117 - - Protein gar2, putative [Ricinus communis]
15 Hb_109050_010 0.1424679117 - - -
16 Hb_011980_030 0.1425727945 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001227_050 0.1426480614 - - -
18 Hb_020367_060 0.1426480614 - - hypothetical protein POPTR_0005s15010g [Populus trichocarpa]
19 Hb_060300_010 0.1427557685 - - hypothetical protein F383_16817 [Gossypium arboreum]
20 Hb_001988_040 0.142806172 - - hypothetical protein CICLE_v10006597mg [Citrus clementina]

Gene co-expression network

sample Hb_010964_030 Hb_010964_030 Hb_030987_010 Hb_030987_010 Hb_010964_030--Hb_030987_010 Hb_000907_050 Hb_000907_050 Hb_010964_030--Hb_000907_050 Hb_003772_010 Hb_003772_010 Hb_010964_030--Hb_003772_010 Hb_001981_020 Hb_001981_020 Hb_010964_030--Hb_001981_020 Hb_186580_020 Hb_186580_020 Hb_010964_030--Hb_186580_020 Hb_027970_010 Hb_027970_010 Hb_010964_030--Hb_027970_010 Hb_030987_010--Hb_000907_050 Hb_030987_010--Hb_003772_010 Hb_098361_010 Hb_098361_010 Hb_030987_010--Hb_098361_010 Hb_000581_070 Hb_000581_070 Hb_030987_010--Hb_000581_070 Hb_007668_030 Hb_007668_030 Hb_030987_010--Hb_007668_030 Hb_000907_050--Hb_003772_010 Hb_001401_030 Hb_001401_030 Hb_000907_050--Hb_001401_030 Hb_024248_010 Hb_024248_010 Hb_000907_050--Hb_024248_010 Hb_062192_050 Hb_062192_050 Hb_000907_050--Hb_062192_050 Hb_003772_010--Hb_001401_030 Hb_003772_010--Hb_062192_050 Hb_003772_010--Hb_024248_010 Hb_005676_020 Hb_005676_020 Hb_003772_010--Hb_005676_020 Hb_003462_170 Hb_003462_170 Hb_001981_020--Hb_003462_170 Hb_001981_020--Hb_030987_010 Hb_125116_020 Hb_125116_020 Hb_001981_020--Hb_125116_020 Hb_001981_020--Hb_062192_050 Hb_001981_020--Hb_000907_050 Hb_186580_020--Hb_027970_010 Hb_085603_010 Hb_085603_010 Hb_186580_020--Hb_085603_010 Hb_002189_020 Hb_002189_020 Hb_186580_020--Hb_002189_020 Hb_060997_010 Hb_060997_010 Hb_186580_020--Hb_060997_010 Hb_000698_050 Hb_000698_050 Hb_186580_020--Hb_000698_050 Hb_062634_010 Hb_062634_010 Hb_186580_020--Hb_062634_010 Hb_027970_010--Hb_002189_020 Hb_027970_010--Hb_060997_010 Hb_027970_010--Hb_000698_050 Hb_001821_040 Hb_001821_040 Hb_027970_010--Hb_001821_040 Hb_027970_010--Hb_085603_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0143478 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0674712 0.277913

CAGE analysis