Hb_011028_040

Information

Type -
Description -
Location Contig11028: 29504-31597
Sequence    

Annotation

kegg
ID rcu:RCOM_1579660
description receptor serine/threonine kinase, putative (EC:2.7.10.2)
nr
ID XP_002513559.1
description receptor serine/threonine kinase, putative [Ricinus communis]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID B9RIJ0
description Receptor serine/threonine kinase, putative OS=Ricinus communis GN=RCOM_1579660 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03196: 29531-31720
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011028_040 0.0 - - receptor serine/threonine kinase, putative [Ricinus communis]
2 Hb_004314_020 0.0748228893 - - Auxin-responsive GH3 family protein [Theobroma cacao]
3 Hb_006873_010 0.0952870473 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_001333_030 0.0960138026 - - Abscisic acid 8'-hydroxylase 1 [Theobroma cacao]
5 Hb_002849_010 0.0970448641 - - PREDICTED: putative UPF0481 protein At3g02645 [Jatropha curcas]
6 Hb_116103_010 0.1048957684 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
7 Hb_000904_110 0.1144025661 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Eucalyptus grandis]
8 Hb_064885_010 0.1225202563 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
9 Hb_186995_010 0.1266454226 - - hypothetical protein POPTR_0012s01755g [Populus trichocarpa]
10 Hb_021576_160 0.1284432595 transcription factor TF Family: WRKY putative WRKY transcription factor family protein [Populus trichocarpa]
11 Hb_011915_020 0.1296114814 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
12 Hb_001032_080 0.1335128444 - - Ankyrin repeat protein [Medicago truncatula]
13 Hb_001221_050 0.133742813 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Jatropha curcas]
14 Hb_006153_020 0.1374871674 - - vacuolar invertase [Manihot esculenta]
15 Hb_001430_010 0.1377600445 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
16 Hb_000170_260 0.1407542711 - - amino acid transporter, putative [Ricinus communis]
17 Hb_051408_010 0.1408307486 - - calcineurin-like phosphoesterase [Manihot esculenta]
18 Hb_002048_100 0.1452463595 - - PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Jatropha curcas]
19 Hb_029622_090 0.1455524374 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 2-like [Jatropha curcas]
20 Hb_004924_020 0.1470176721 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_011028_040 Hb_011028_040 Hb_004314_020 Hb_004314_020 Hb_011028_040--Hb_004314_020 Hb_006873_010 Hb_006873_010 Hb_011028_040--Hb_006873_010 Hb_001333_030 Hb_001333_030 Hb_011028_040--Hb_001333_030 Hb_002849_010 Hb_002849_010 Hb_011028_040--Hb_002849_010 Hb_116103_010 Hb_116103_010 Hb_011028_040--Hb_116103_010 Hb_000904_110 Hb_000904_110 Hb_011028_040--Hb_000904_110 Hb_000170_260 Hb_000170_260 Hb_004314_020--Hb_000170_260 Hb_004314_020--Hb_002849_010 Hb_004314_020--Hb_006873_010 Hb_001032_080 Hb_001032_080 Hb_004314_020--Hb_001032_080 Hb_136973_020 Hb_136973_020 Hb_004314_020--Hb_136973_020 Hb_004316_020 Hb_004316_020 Hb_006873_010--Hb_004316_020 Hb_018563_010 Hb_018563_010 Hb_006873_010--Hb_018563_010 Hb_186995_010 Hb_186995_010 Hb_006873_010--Hb_186995_010 Hb_009252_090 Hb_009252_090 Hb_006873_010--Hb_009252_090 Hb_021576_160 Hb_021576_160 Hb_001333_030--Hb_021576_160 Hb_006153_020 Hb_006153_020 Hb_001333_030--Hb_006153_020 Hb_001221_050 Hb_001221_050 Hb_001333_030--Hb_001221_050 Hb_003427_020 Hb_003427_020 Hb_001333_030--Hb_003427_020 Hb_001022_070 Hb_001022_070 Hb_001333_030--Hb_001022_070 Hb_002849_010--Hb_116103_010 Hb_002849_010--Hb_000904_110 Hb_064885_010 Hb_064885_010 Hb_002849_010--Hb_064885_010 Hb_000628_050 Hb_000628_050 Hb_002849_010--Hb_000628_050 Hb_116103_010--Hb_000904_110 Hb_116103_010--Hb_064885_010 Hb_004924_020 Hb_004924_020 Hb_116103_010--Hb_004924_020 Hb_173029_010 Hb_173029_010 Hb_116103_010--Hb_173029_010 Hb_000668_220 Hb_000668_220 Hb_116103_010--Hb_000668_220 Hb_000904_110--Hb_064885_010 Hb_000904_110--Hb_173029_010 Hb_000904_110--Hb_004924_020 Hb_000904_110--Hb_000668_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0673161 25.2846 35.9247 34.4246 0 0.0628158
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.171691 0.135088 0.0730372 0.376488 3.70284

CAGE analysis