Hb_011037_030

Information

Type -
Description -
Location Contig11037: 45287-57307
Sequence    

Annotation

kegg
ID rcu:RCOM_0814350
description hypothetical protein
nr
ID XP_012081327.1
description PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18587 PE=4 SV=1
Gene Ontology
ID GO:0003677
description PREDICTED: uncharacterized protein LOC105641407

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03227: 23452-54818
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011037_030 0.0 - - PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]
2 Hb_000156_010 0.0382582126 - - phospho-n-acetylmuramoyl-pentapeptide-transferase, putative [Ricinus communis]
3 Hb_006455_120 0.0501745083 - - n6-DNA-methyltransferase, putative [Ricinus communis]
4 Hb_054865_150 0.0506432934 - - PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Jatropha curcas]
5 Hb_000345_380 0.0538246737 - - PREDICTED: long chain acyl-CoA synthetase 7, peroxisomal [Jatropha curcas]
6 Hb_105328_020 0.0560471906 - - PREDICTED: phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN [Jatropha curcas]
7 Hb_003750_050 0.0573109144 - - PREDICTED: THO complex subunit 4D isoform X1 [Jatropha curcas]
8 Hb_002110_190 0.0574586575 - - PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Jatropha curcas]
9 Hb_006634_070 0.0579090681 - - PREDICTED: calcium-dependent protein kinase 13 [Jatropha curcas]
10 Hb_007479_040 0.0605669783 - - conserved hypothetical protein [Ricinus communis]
11 Hb_016172_020 0.0607007676 - - PREDICTED: pentatricopeptide repeat-containing protein At5g18390, mitochondrial-like [Jatropha curcas]
12 Hb_003680_120 0.0607454951 - - PREDICTED: E3 ubiquitin-protein ligase UPL7 [Jatropha curcas]
13 Hb_000331_260 0.0619980635 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
14 Hb_001409_020 0.0629468818 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105638648 [Jatropha curcas]
15 Hb_004143_060 0.0630635977 - - DNA binding protein, putative [Ricinus communis]
16 Hb_000120_670 0.0654866867 - - PREDICTED: SRSF protein kinase 2-like [Jatropha curcas]
17 Hb_000215_110 0.0659734574 - - PREDICTED: uncharacterized protein C3F10.06c isoform X1 [Jatropha curcas]
18 Hb_000327_270 0.0664521577 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]
19 Hb_010618_010 0.0670795979 - - PREDICTED: inactive poly [ADP-ribose] polymerase RCD1 [Jatropha curcas]
20 Hb_005144_160 0.067391317 - - PREDICTED: uncharacterized protein LOC105628018 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_011037_030 Hb_011037_030 Hb_000156_010 Hb_000156_010 Hb_011037_030--Hb_000156_010 Hb_006455_120 Hb_006455_120 Hb_011037_030--Hb_006455_120 Hb_054865_150 Hb_054865_150 Hb_011037_030--Hb_054865_150 Hb_000345_380 Hb_000345_380 Hb_011037_030--Hb_000345_380 Hb_105328_020 Hb_105328_020 Hb_011037_030--Hb_105328_020 Hb_003750_050 Hb_003750_050 Hb_011037_030--Hb_003750_050 Hb_000156_010--Hb_003750_050 Hb_000156_010--Hb_054865_150 Hb_012498_010 Hb_012498_010 Hb_000156_010--Hb_012498_010 Hb_000156_010--Hb_105328_020 Hb_005291_050 Hb_005291_050 Hb_000156_010--Hb_005291_050 Hb_006634_070 Hb_006634_070 Hb_006455_120--Hb_006634_070 Hb_000300_500 Hb_000300_500 Hb_006455_120--Hb_000300_500 Hb_000603_150 Hb_000603_150 Hb_006455_120--Hb_000603_150 Hb_000580_180 Hb_000580_180 Hb_006455_120--Hb_000580_180 Hb_006455_120--Hb_000156_010 Hb_000172_290 Hb_000172_290 Hb_054865_150--Hb_000172_290 Hb_000254_090 Hb_000254_090 Hb_054865_150--Hb_000254_090 Hb_000318_290 Hb_000318_290 Hb_054865_150--Hb_000318_290 Hb_002110_190 Hb_002110_190 Hb_054865_150--Hb_002110_190 Hb_000345_380--Hb_105328_020 Hb_000030_190 Hb_000030_190 Hb_000345_380--Hb_000030_190 Hb_000789_310 Hb_000789_310 Hb_000345_380--Hb_000789_310 Hb_008406_200 Hb_008406_200 Hb_000345_380--Hb_008406_200 Hb_001409_020 Hb_001409_020 Hb_000345_380--Hb_001409_020 Hb_000170_090 Hb_000170_090 Hb_105328_020--Hb_000170_090 Hb_006588_170 Hb_006588_170 Hb_105328_020--Hb_006588_170 Hb_013399_020 Hb_013399_020 Hb_105328_020--Hb_013399_020 Hb_000120_670 Hb_000120_670 Hb_003750_050--Hb_000120_670 Hb_001279_150 Hb_001279_150 Hb_003750_050--Hb_001279_150 Hb_002811_180 Hb_002811_180 Hb_003750_050--Hb_002811_180 Hb_003750_050--Hb_054865_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.7396 12.0583 12.1308 16.9779 13.5154 20.7378
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.8674 15.1114 15.8414 13.9793 13.5881

CAGE analysis