Hb_011101_010

Information

Type -
Description -
Location Contig11101: 28082-28554
Sequence    

Annotation

kegg
ID rcu:RCOM_0841220
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID KDP24879.1
description hypothetical protein JCGZ_25132 [Jatropha curcas]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID A0A067JZA0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25132 PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03433: 28005-29283
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011101_010 0.0 - - hypothetical protein JCGZ_25132 [Jatropha curcas]
2 Hb_000365_190 0.1060776774 - - PREDICTED: protein LURP-one-related 8 [Jatropha curcas]
3 Hb_123078_010 0.1065595963 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
4 Hb_004218_290 0.1081580217 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 6 isoform X2 [Jatropha curcas]
5 Hb_001587_220 0.108394239 - - receptor protein kinase, putative [Ricinus communis]
6 Hb_002267_030 0.1190552517 - - hypothetical protein JCGZ_24883 [Jatropha curcas]
7 Hb_000252_190 0.1213113522 - - PREDICTED: uncharacterized protein LOC105644975 [Jatropha curcas]
8 Hb_000742_260 0.1244478947 - - hypothetical protein RCOM_1336320 [Ricinus communis]
9 Hb_145139_010 0.1286694674 - - PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Vitis vinifera]
10 Hb_000922_290 0.1300761546 - - PREDICTED: probable boron transporter 2 [Jatropha curcas]
11 Hb_004586_230 0.1304935935 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005714_140 0.133067539 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
13 Hb_002236_020 0.1344647866 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
14 Hb_113396_010 0.1364559808 - - cytochrome P450, putative [Ricinus communis]
15 Hb_005892_010 0.1383311434 - - PREDICTED: uncharacterized protein LOC105632168 [Jatropha curcas]
16 Hb_009787_020 0.1388535543 - - PREDICTED: cytochrome P450 705A5-like [Jatropha curcas]
17 Hb_006573_060 0.1391776173 - - hypothetical protein [Bruguiera gymnorhiza]
18 Hb_000656_370 0.143049794 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
19 Hb_000702_040 0.1444494229 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
20 Hb_013691_060 0.1450297756 - - PREDICTED: uncharacterized protein LOC105119066 [Populus euphratica]

Gene co-expression network

sample Hb_011101_010 Hb_011101_010 Hb_000365_190 Hb_000365_190 Hb_011101_010--Hb_000365_190 Hb_123078_010 Hb_123078_010 Hb_011101_010--Hb_123078_010 Hb_004218_290 Hb_004218_290 Hb_011101_010--Hb_004218_290 Hb_001587_220 Hb_001587_220 Hb_011101_010--Hb_001587_220 Hb_002267_030 Hb_002267_030 Hb_011101_010--Hb_002267_030 Hb_000252_190 Hb_000252_190 Hb_011101_010--Hb_000252_190 Hb_113396_010 Hb_113396_010 Hb_000365_190--Hb_113396_010 Hb_026048_030 Hb_026048_030 Hb_000365_190--Hb_026048_030 Hb_000742_260 Hb_000742_260 Hb_000365_190--Hb_000742_260 Hb_001310_080 Hb_001310_080 Hb_000365_190--Hb_001310_080 Hb_004586_230 Hb_004586_230 Hb_000365_190--Hb_004586_230 Hb_000041_160 Hb_000041_160 Hb_123078_010--Hb_000041_160 Hb_105814_020 Hb_105814_020 Hb_123078_010--Hb_105814_020 Hb_027474_010 Hb_027474_010 Hb_123078_010--Hb_027474_010 Hb_123078_010--Hb_002267_030 Hb_123078_010--Hb_004218_290 Hb_004218_290--Hb_000742_260 Hb_004218_290--Hb_000365_190 Hb_013691_060 Hb_013691_060 Hb_004218_290--Hb_013691_060 Hb_004218_290--Hb_002267_030 Hb_006573_060 Hb_006573_060 Hb_001587_220--Hb_006573_060 Hb_000702_040 Hb_000702_040 Hb_001587_220--Hb_000702_040 Hb_005892_010 Hb_005892_010 Hb_001587_220--Hb_005892_010 Hb_001587_220--Hb_004586_230 Hb_000137_030 Hb_000137_030 Hb_001587_220--Hb_000137_030 Hb_005714_140 Hb_005714_140 Hb_002267_030--Hb_005714_140 Hb_000260_130 Hb_000260_130 Hb_002267_030--Hb_000260_130 Hb_008550_030 Hb_008550_030 Hb_002267_030--Hb_008550_030 Hb_002267_030--Hb_105814_020 Hb_002820_090 Hb_002820_090 Hb_002267_030--Hb_002820_090 Hb_002236_020 Hb_002236_020 Hb_000252_190--Hb_002236_020 Hb_024857_010 Hb_024857_010 Hb_000252_190--Hb_024857_010 Hb_087468_010 Hb_087468_010 Hb_000252_190--Hb_087468_010 Hb_000252_190--Hb_005714_140 Hb_003800_010 Hb_003800_010 Hb_000252_190--Hb_003800_010 Hb_000656_370 Hb_000656_370 Hb_000252_190--Hb_000656_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 32.6957 4.0581 22.1166 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.184208 0.144686 0 3.19965 6.18648

CAGE analysis