Hb_011114_030

Information

Type -
Description -
Location Contig11114: 28868-30205
Sequence    

Annotation

kegg
ID rcu:RCOM_0737900
description Gibberellin receptor GID1, putative
nr
ID XP_012066325.1
description PREDICTED: probable carboxylesterase 15 [Jatropha curcas]
swissprot
ID Q9FG13
description Probable carboxylesterase 15 OS=Arabidopsis thaliana GN=CXE15 PE=2 SV=1
trembl
ID A0A067L3A9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23893 PE=4 SV=1
Gene Ontology
ID GO:0016787
description probable carboxylesterase 15

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011114_030 0.0 - - PREDICTED: probable carboxylesterase 15 [Jatropha curcas]
2 Hb_004965_060 0.151459682 - - PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Jatropha curcas]
3 Hb_000762_070 0.1765312549 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
4 Hb_003987_030 0.1919167814 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
5 Hb_001408_050 0.1937022844 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001135_290 0.1974612623 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
7 Hb_003576_050 0.1987761596 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
8 Hb_002750_010 0.1993170421 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
9 Hb_006594_060 0.200805902 transcription factor TF Family: HSF PREDICTED: heat shock factor protein HSF24 [Jatropha curcas]
10 Hb_067034_030 0.2032397047 - - ATP-binding cassette transporter, putative [Ricinus communis]
11 Hb_009545_020 0.2045866591 - - PREDICTED: uncharacterized protein LOC105632008 [Jatropha curcas]
12 Hb_001248_030 0.2054589953 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_001649_040 0.210400892 - - Polygalacturonase precursor, putative [Ricinus communis]
14 Hb_000086_370 0.2107778957 - - Long-chain-alcohol oxidase FAO2 [Triticum urartu]
15 Hb_003399_030 0.2119579215 - - PREDICTED: isoflavone 2'-hydroxylase-like [Jatropha curcas]
16 Hb_000589_180 0.2132954859 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 9 [Jatropha curcas]
17 Hb_000811_010 0.2147931482 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF118 [Jatropha curcas]
18 Hb_000181_160 0.2158320813 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
19 Hb_007259_040 0.2177705431 - - hypothetical protein VITISV_005492 [Vitis vinifera]
20 Hb_004316_030 0.2177960841 - - hypothetical protein JCGZ_23475 [Jatropha curcas]

Gene co-expression network

sample Hb_011114_030 Hb_011114_030 Hb_004965_060 Hb_004965_060 Hb_011114_030--Hb_004965_060 Hb_000762_070 Hb_000762_070 Hb_011114_030--Hb_000762_070 Hb_003987_030 Hb_003987_030 Hb_011114_030--Hb_003987_030 Hb_001408_050 Hb_001408_050 Hb_011114_030--Hb_001408_050 Hb_001135_290 Hb_001135_290 Hb_011114_030--Hb_001135_290 Hb_003576_050 Hb_003576_050 Hb_011114_030--Hb_003576_050 Hb_009545_020 Hb_009545_020 Hb_004965_060--Hb_009545_020 Hb_000067_030 Hb_000067_030 Hb_004965_060--Hb_000067_030 Hb_067034_030 Hb_067034_030 Hb_004965_060--Hb_067034_030 Hb_003142_090 Hb_003142_090 Hb_004965_060--Hb_003142_090 Hb_003120_040 Hb_003120_040 Hb_004965_060--Hb_003120_040 Hb_000976_440 Hb_000976_440 Hb_000762_070--Hb_000976_440 Hb_000762_070--Hb_001408_050 Hb_004316_030 Hb_004316_030 Hb_000762_070--Hb_004316_030 Hb_009823_010 Hb_009823_010 Hb_000762_070--Hb_009823_010 Hb_000762_070--Hb_003576_050 Hb_164010_090 Hb_164010_090 Hb_000762_070--Hb_164010_090 Hb_000236_050 Hb_000236_050 Hb_003987_030--Hb_000236_050 Hb_002750_010 Hb_002750_010 Hb_003987_030--Hb_002750_010 Hb_008695_130 Hb_008695_130 Hb_003987_030--Hb_008695_130 Hb_000034_030 Hb_000034_030 Hb_003987_030--Hb_000034_030 Hb_006711_020 Hb_006711_020 Hb_003987_030--Hb_006711_020 Hb_005237_040 Hb_005237_040 Hb_003987_030--Hb_005237_040 Hb_003453_030 Hb_003453_030 Hb_001408_050--Hb_003453_030 Hb_001408_050--Hb_009823_010 Hb_000181_160 Hb_000181_160 Hb_001408_050--Hb_000181_160 Hb_001678_030 Hb_001678_030 Hb_001408_050--Hb_001678_030 Hb_001408_050--Hb_003576_050 Hb_000638_090 Hb_000638_090 Hb_001408_050--Hb_000638_090 Hb_019229_020 Hb_019229_020 Hb_001135_290--Hb_019229_020 Hb_000616_050 Hb_000616_050 Hb_001135_290--Hb_000616_050 Hb_001838_050 Hb_001838_050 Hb_001135_290--Hb_001838_050 Hb_003399_030 Hb_003399_030 Hb_001135_290--Hb_003399_030 Hb_001104_280 Hb_001104_280 Hb_001135_290--Hb_001104_280 Hb_001638_110 Hb_001638_110 Hb_001135_290--Hb_001638_110 Hb_003576_050--Hb_009823_010 Hb_003517_020 Hb_003517_020 Hb_003576_050--Hb_003517_020 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_000928_040 Hb_000928_040 Hb_003576_050--Hb_000928_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0919798 6.82694 0.741732 2.43156 0.168605 0.32665
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0886546 2.05713 0 9.49738 1.43695

CAGE analysis