Hb_011200_020

Information

Type -
Description -
Location Contig11200: 17977-20014
Sequence    

Annotation

kegg
ID rcu:RCOM_0777680
description aldo-keto reductase, putative (EC:2.3.1.170)
nr
ID XP_002521902.1
description aldo-keto reductase, putative [Ricinus communis]
swissprot
ID Q9SQ64
description Non-functional NADPH-dependent codeinone reductase 2 OS=Papaver somniferum GN=COR2 PE=1 SV=1
trembl
ID B9S7D3
description Aldo-keto reductase, putative OS=Ricinus communis GN=RCOM_0777680 PE=4 SV=1
Gene Ontology
ID GO:0016491
description non-functional nadph-dependent codeinone reductase 2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03632: 18053-19499
cDNA
(Sanger)
(ID:Location)		 002_M08.ab1: 18053-19499

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011200_020 0.0 - - aldo-keto reductase, putative [Ricinus communis]
2 Hb_000098_310 0.1226424246 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
3 Hb_001504_220 0.1261511971 - - ABC transporter family protein [Hevea brasiliensis]
4 Hb_032225_040 0.1283162328 - - -
5 Hb_031042_030 0.1367894092 - - PREDICTED: WAT1-related protein At5g47470-like isoform X1 [Jatropha curcas]
6 Hb_032631_050 0.1370904711 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
7 Hb_000421_270 0.1372891779 transcription factor TF Family: LOB LOB domain-containing protein 1 [Theobroma cacao]
8 Hb_001024_030 0.1444522433 - - PREDICTED: E3 ubiquitin-protein ligase RGLG2-like isoform X1 [Jatropha curcas]
9 Hb_002272_230 0.1446657531 - - sodium/hydrogen exchanger, putative [Ricinus communis]
10 Hb_000963_200 0.1478760967 - - beta-galactosidase, putative [Ricinus communis]
11 Hb_004657_040 0.1483353382 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
12 Hb_000077_330 0.1502152906 - - PREDICTED: bifunctional epoxide hydrolase 2-like [Jatropha curcas]
13 Hb_001649_040 0.1512049664 - - Polygalacturonase precursor, putative [Ricinus communis]
14 Hb_002025_350 0.1514496749 - - PREDICTED: glutamate decarboxylase 4 [Jatropha curcas]
15 Hb_012553_020 0.155284876 - - hypothetical protein JCGZ_09282 [Jatropha curcas]
16 Hb_000181_160 0.1579560273 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
17 Hb_000753_250 0.1601340194 - - PREDICTED: uncharacterized protein LOC105640661 [Jatropha curcas]
18 Hb_014037_010 0.1601640372 - - PREDICTED: uncharacterized protein LOC105641871 [Jatropha curcas]
19 Hb_029584_090 0.1649224735 - - PREDICTED: inactive protein kinase SELMODRAFT_444075 [Jatropha curcas]
20 Hb_009785_010 0.1652552264 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]

Gene co-expression network

sample Hb_011200_020 Hb_011200_020 Hb_000098_310 Hb_000098_310 Hb_011200_020--Hb_000098_310 Hb_001504_220 Hb_001504_220 Hb_011200_020--Hb_001504_220 Hb_032225_040 Hb_032225_040 Hb_011200_020--Hb_032225_040 Hb_031042_030 Hb_031042_030 Hb_011200_020--Hb_031042_030 Hb_032631_050 Hb_032631_050 Hb_011200_020--Hb_032631_050 Hb_000421_270 Hb_000421_270 Hb_011200_020--Hb_000421_270 Hb_009823_010 Hb_009823_010 Hb_000098_310--Hb_009823_010 Hb_003576_050 Hb_003576_050 Hb_000098_310--Hb_003576_050 Hb_000181_160 Hb_000181_160 Hb_000098_310--Hb_000181_160 Hb_001408_050 Hb_001408_050 Hb_000098_310--Hb_001408_050 Hb_000098_310--Hb_031042_030 Hb_012553_020 Hb_012553_020 Hb_001504_220--Hb_012553_020 Hb_014037_010 Hb_014037_010 Hb_001504_220--Hb_014037_010 Hb_003399_030 Hb_003399_030 Hb_001504_220--Hb_003399_030 Hb_000152_810 Hb_000152_810 Hb_001504_220--Hb_000152_810 Hb_011063_060 Hb_011063_060 Hb_001504_220--Hb_011063_060 Hb_000138_020 Hb_000138_020 Hb_032225_040--Hb_000138_020 Hb_032225_040--Hb_000098_310 Hb_000300_590 Hb_000300_590 Hb_032225_040--Hb_000300_590 Hb_002835_350 Hb_002835_350 Hb_032225_040--Hb_002835_350 Hb_032225_040--Hb_032631_050 Hb_001024_030 Hb_001024_030 Hb_031042_030--Hb_001024_030 Hb_002686_390 Hb_002686_390 Hb_031042_030--Hb_002686_390 Hb_031042_030--Hb_011063_060 Hb_000230_230 Hb_000230_230 Hb_031042_030--Hb_000230_230 Hb_000254_040 Hb_000254_040 Hb_031042_030--Hb_000254_040 Hb_032631_050--Hb_000421_270 Hb_001348_210 Hb_001348_210 Hb_032631_050--Hb_001348_210 Hb_000963_200 Hb_000963_200 Hb_032631_050--Hb_000963_200 Hb_002025_350 Hb_002025_350 Hb_032631_050--Hb_002025_350 Hb_029584_090 Hb_029584_090 Hb_032631_050--Hb_029584_090 Hb_000421_270--Hb_002025_350 Hb_000116_590 Hb_000116_590 Hb_000421_270--Hb_000116_590 Hb_000421_270--Hb_029584_090 Hb_000421_270--Hb_000963_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.617375 7.73273 4.32073 5.26798 0.171425 0.308873
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.17889 1.50292 0.713771 26.3759 3.90415

CAGE analysis