Hb_011282_030

Information

Type -
Description -
Location Contig11282: 48679-58954
Sequence    

Annotation

kegg
ID rcu:RCOM_1448110
description phosphatidylinositol transporter, putative
nr
ID XP_012067235.1
description PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
swissprot
ID F4IHJ0
description Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana GN=SFH8 PE=2 SV=1
trembl
ID A0A067L001
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26779 PE=4 SV=1
Gene Ontology
ID GO:0005622
description phosphatidylinositol phosphatidylcholine transfer protein sfh8-like isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03872: 48689-58598
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011282_030 0.0 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8 isoform X1 [Jatropha curcas]
2 Hb_001584_110 0.0657264168 - - PREDICTED: importin subunit alpha-4 isoform X2 [Jatropha curcas]
3 Hb_000230_330 0.0809139399 - - PREDICTED: calcium-binding protein 39-like [Populus euphratica]
4 Hb_014568_030 0.082634354 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
5 Hb_022256_040 0.087562346 - - PREDICTED: probable E3 ubiquitin-protein ligase rbrA isoform X2 [Jatropha curcas]
6 Hb_000462_150 0.0876746775 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 38 [Jatropha curcas]
7 Hb_010222_030 0.0891237221 - - PREDICTED: uncharacterized protein LOC105647641 [Jatropha curcas]
8 Hb_079326_010 0.0892125898 - - PREDICTED: uncharacterized protein LOC105630719 isoform X1 [Jatropha curcas]
9 Hb_002014_080 0.0894896214 - - PREDICTED: tankyrase-1 isoform X4 [Jatropha curcas]
10 Hb_000390_060 0.0931383229 - - PREDICTED: F-box/kelch-repeat protein At5g60570-like [Jatropha curcas]
11 Hb_001969_040 0.0954062454 - - PREDICTED: serine-threonine kinase receptor-associated protein-like [Jatropha curcas]
12 Hb_002874_070 0.0963296504 - - PREDICTED: RNA-binding KH domain-containing protein PEPPER-like [Jatropha curcas]
13 Hb_003352_050 0.0995971811 - - PREDICTED: uncharacterized protein LOC105643709 [Jatropha curcas]
14 Hb_063716_010 0.100563806 - - phopholipase d alpha, putative [Ricinus communis]
15 Hb_011644_020 0.1027371048 - - PREDICTED: choline-phosphate cytidylyltransferase 2 [Vitis vinifera]
16 Hb_000077_050 0.1028315937 - - PREDICTED: elongation factor G-1, mitochondrial isoform X1 [Jatropha curcas]
17 Hb_002818_040 0.1028902474 - - tRNA synthetase-related family protein [Populus trichocarpa]
18 Hb_012760_170 0.1033088989 - - PREDICTED: la-related protein 1C-like isoform X1 [Jatropha curcas]
19 Hb_000034_050 0.1041845874 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
20 Hb_010866_040 0.1048580799 - - PREDICTED: metal transporter Nramp2-like [Jatropha curcas]

Gene co-expression network

sample Hb_011282_030 Hb_011282_030 Hb_001584_110 Hb_001584_110 Hb_011282_030--Hb_001584_110 Hb_000230_330 Hb_000230_330 Hb_011282_030--Hb_000230_330 Hb_014568_030 Hb_014568_030 Hb_011282_030--Hb_014568_030 Hb_022256_040 Hb_022256_040 Hb_011282_030--Hb_022256_040 Hb_000462_150 Hb_000462_150 Hb_011282_030--Hb_000462_150 Hb_010222_030 Hb_010222_030 Hb_011282_030--Hb_010222_030 Hb_001584_110--Hb_000230_330 Hb_002874_070 Hb_002874_070 Hb_001584_110--Hb_002874_070 Hb_001584_110--Hb_014568_030 Hb_000390_060 Hb_000390_060 Hb_001584_110--Hb_000390_060 Hb_001584_110--Hb_000462_150 Hb_000230_330--Hb_000390_060 Hb_001504_160 Hb_001504_160 Hb_000230_330--Hb_001504_160 Hb_000230_330--Hb_000462_150 Hb_003434_060 Hb_003434_060 Hb_000230_330--Hb_003434_060 Hb_000076_080 Hb_000076_080 Hb_000230_330--Hb_000076_080 Hb_000077_050 Hb_000077_050 Hb_014568_030--Hb_000077_050 Hb_002014_080 Hb_002014_080 Hb_014568_030--Hb_002014_080 Hb_024714_030 Hb_024714_030 Hb_014568_030--Hb_024714_030 Hb_001855_010 Hb_001855_010 Hb_014568_030--Hb_001855_010 Hb_002997_100 Hb_002997_100 Hb_022256_040--Hb_002997_100 Hb_022256_040--Hb_002874_070 Hb_002631_050 Hb_002631_050 Hb_022256_040--Hb_002631_050 Hb_000733_060 Hb_000733_060 Hb_022256_040--Hb_000733_060 Hb_022256_040--Hb_000230_330 Hb_022256_040--Hb_001584_110 Hb_003384_030 Hb_003384_030 Hb_000462_150--Hb_003384_030 Hb_001969_040 Hb_001969_040 Hb_000462_150--Hb_001969_040 Hb_002818_040 Hb_002818_040 Hb_000462_150--Hb_002818_040 Hb_000001_180 Hb_000001_180 Hb_000462_150--Hb_000001_180 Hb_024714_020 Hb_024714_020 Hb_010222_030--Hb_024714_020 Hb_001863_110 Hb_001863_110 Hb_010222_030--Hb_001863_110 Hb_000034_050 Hb_000034_050 Hb_010222_030--Hb_000034_050 Hb_010222_030--Hb_000230_330 Hb_010222_080 Hb_010222_080 Hb_010222_030--Hb_010222_080 Hb_001584_290 Hb_001584_290 Hb_010222_030--Hb_001584_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
204.748 36.1173 29.2674 71.4446 193.884 219.52
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
111.419 53.6107 120.81 47.3068 28.669

CAGE analysis