Hb_011318_010

Information

Type -
Description -
Location Contig11318: 11109-20758
Sequence    

Annotation

kegg
ID mdm:103447566
description peroxisome biogenesis protein 5-like
nr
ID XP_012081868.1
description PREDICTED: peroxisome biogenesis protein 5 [Jatropha curcas]
swissprot
ID Q9FMA3
description Peroxisome biogenesis protein 5 OS=Arabidopsis thaliana GN=PEX5 PE=1 SV=1
trembl
ID A0A067KCF2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19232 PE=4 SV=1
Gene Ontology
ID GO:0005622
description peroxisome biogenesis protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03952: 20113-20729
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011318_010 0.0 - - PREDICTED: peroxisome biogenesis protein 5 [Jatropha curcas]
2 Hb_004452_100 0.0706270502 - - PREDICTED: uncharacterized protein LOC105639563 [Jatropha curcas]
3 Hb_000005_380 0.0711412082 - - PREDICTED: uncharacterized protein LOC105634023 isoform X1 [Jatropha curcas]
4 Hb_002798_040 0.0767510614 transcription factor TF Family: MYB cell division control protein, putative [Ricinus communis]
5 Hb_090804_010 0.0814581366 - - ATP-dependent RNA helicase, putative [Ricinus communis]
6 Hb_000244_250 0.0836794562 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 38 isoform X1 [Jatropha curcas]
7 Hb_002054_040 0.0845897713 - - PREDICTED: putative clathrin assembly protein At5g35200 [Jatropha curcas]
8 Hb_003362_040 0.0858098121 - - PREDICTED: probable methionine--tRNA ligase [Jatropha curcas]
9 Hb_000915_050 0.0867815251 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005977_090 0.0890335827 - - PREDICTED: F-box/kelch-repeat protein At1g16250 [Jatropha curcas]
11 Hb_004204_020 0.0893186478 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105640780 [Jatropha curcas]
12 Hb_000878_010 0.0894758837 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g06400, mitochondrial [Jatropha curcas]
13 Hb_001017_040 0.0897832377 - - PREDICTED: protein GLE1 isoform X2 [Populus euphratica]
14 Hb_000046_440 0.0909679079 transcription factor TF Family: SNF2 PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatropha curcas]
15 Hb_004619_050 0.0918861062 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 8-like isoform X2 [Jatropha curcas]
16 Hb_007586_030 0.0923058534 - - PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like isoform X1 [Jatropha curcas]
17 Hb_123777_030 0.093045352 transcription factor TF Family: SNF2 PREDICTED: DNA helicase INO80 isoform X2 [Jatropha curcas]
18 Hb_000429_120 0.0939367018 - - PREDICTED: DNA-directed RNA polymerase I subunit rpa1 [Jatropha curcas]
19 Hb_010931_080 0.095052304 - - PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Jatropha curcas]
20 Hb_000179_020 0.0950543335 - - amidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_011318_010 Hb_011318_010 Hb_004452_100 Hb_004452_100 Hb_011318_010--Hb_004452_100 Hb_000005_380 Hb_000005_380 Hb_011318_010--Hb_000005_380 Hb_002798_040 Hb_002798_040 Hb_011318_010--Hb_002798_040 Hb_090804_010 Hb_090804_010 Hb_011318_010--Hb_090804_010 Hb_000244_250 Hb_000244_250 Hb_011318_010--Hb_000244_250 Hb_002054_040 Hb_002054_040 Hb_011318_010--Hb_002054_040 Hb_004452_100--Hb_002798_040 Hb_001366_040 Hb_001366_040 Hb_004452_100--Hb_001366_040 Hb_004452_100--Hb_000244_250 Hb_002039_010 Hb_002039_010 Hb_004452_100--Hb_002039_010 Hb_000184_110 Hb_000184_110 Hb_004452_100--Hb_000184_110 Hb_007586_030 Hb_007586_030 Hb_000005_380--Hb_007586_030 Hb_000005_380--Hb_000244_250 Hb_123777_030 Hb_123777_030 Hb_000005_380--Hb_123777_030 Hb_005977_090 Hb_005977_090 Hb_000005_380--Hb_005977_090 Hb_004055_040 Hb_004055_040 Hb_000005_380--Hb_004055_040 Hb_000100_070 Hb_000100_070 Hb_002798_040--Hb_000100_070 Hb_002798_040--Hb_001366_040 Hb_002798_040--Hb_000244_250 Hb_010931_080 Hb_010931_080 Hb_002798_040--Hb_010931_080 Hb_004204_020 Hb_004204_020 Hb_090804_010--Hb_004204_020 Hb_009627_010 Hb_009627_010 Hb_090804_010--Hb_009627_010 Hb_003362_040 Hb_003362_040 Hb_090804_010--Hb_003362_040 Hb_002805_070 Hb_002805_070 Hb_090804_010--Hb_002805_070 Hb_000206_250 Hb_000206_250 Hb_090804_010--Hb_000206_250 Hb_000915_050 Hb_000915_050 Hb_000244_250--Hb_000915_050 Hb_000244_250--Hb_007586_030 Hb_022408_010 Hb_022408_010 Hb_000244_250--Hb_022408_010 Hb_001541_020 Hb_001541_020 Hb_000244_250--Hb_001541_020 Hb_000244_250--Hb_003362_040 Hb_000166_110 Hb_000166_110 Hb_002054_040--Hb_000166_110 Hb_000031_220 Hb_000031_220 Hb_002054_040--Hb_000031_220 Hb_000260_220 Hb_000260_220 Hb_002054_040--Hb_000260_220 Hb_002374_050 Hb_002374_050 Hb_002054_040--Hb_002374_050 Hb_000134_090 Hb_000134_090 Hb_002054_040--Hb_000134_090 Hb_002982_040 Hb_002982_040 Hb_002054_040--Hb_002982_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.1667 9.42205 4.23129 5.03252 15.4665 28.8252
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.5693 6.23682 17.5431 10.708 10.217

CAGE analysis