Hb_011344_050

Information

Type -
Description -
Location Contig11344: 34722-35330
Sequence    

Annotation

kegg
ID rcu:RCOM_1679850
description 21 kDa protein precursor, putative
nr
ID XP_012087119.1
description PREDICTED: 21 kDa protein [Jatropha curcas]
swissprot
ID P17407
description 21 kDa protein OS=Daucus carota PE=2 SV=1
trembl
ID A0A067JNQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20772 PE=4 SV=1
Gene Ontology
ID GO:0004857
description 21 kda protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_050 0.0 - - PREDICTED: 21 kDa protein [Jatropha curcas]
2 Hb_004757_010 0.0679623817 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
3 Hb_027411_030 0.0781045991 - - metal ion binding protein, putative [Ricinus communis]
4 Hb_010863_020 0.0821463838 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
5 Hb_006618_100 0.0874283826 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
6 Hb_013399_060 0.090729823 - - PREDICTED: uncharacterized protein LOC105133408 [Populus euphratica]
7 Hb_001296_010 0.0913519328 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001579_160 0.0945196145 - - PREDICTED: kininogen-1-like [Jatropha curcas]
9 Hb_001541_170 0.0993556784 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
10 Hb_004617_010 0.0994216026 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
11 Hb_145975_010 0.0999578454 - - cytochrome P450, putative [Ricinus communis]
12 Hb_159791_010 0.1008474504 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
13 Hb_002030_190 0.1042769358 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000959_170 0.1057243826 - - Cell division protein kinase 7, putative [Ricinus communis]
15 Hb_000991_060 0.1067109937 - - PREDICTED: thaumatin-like protein [Jatropha curcas]
16 Hb_180088_010 0.1093904369 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_012217_010 0.1099754392 - - PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Jatropha curcas]
18 Hb_000098_230 0.1100611252 - - Potassium channel AKT2/3, putative [Ricinus communis]
19 Hb_007919_010 0.1102391497 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001141_430 0.1112866954 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]

Gene co-expression network

sample Hb_011344_050 Hb_011344_050 Hb_004757_010 Hb_004757_010 Hb_011344_050--Hb_004757_010 Hb_027411_030 Hb_027411_030 Hb_011344_050--Hb_027411_030 Hb_010863_020 Hb_010863_020 Hb_011344_050--Hb_010863_020 Hb_006618_100 Hb_006618_100 Hb_011344_050--Hb_006618_100 Hb_013399_060 Hb_013399_060 Hb_011344_050--Hb_013399_060 Hb_001296_010 Hb_001296_010 Hb_011344_050--Hb_001296_010 Hb_159791_010 Hb_159791_010 Hb_004757_010--Hb_159791_010 Hb_001343_060 Hb_001343_060 Hb_004757_010--Hb_001343_060 Hb_001141_430 Hb_001141_430 Hb_004757_010--Hb_001141_430 Hb_004757_010--Hb_027411_030 Hb_001712_010 Hb_001712_010 Hb_004757_010--Hb_001712_010 Hb_001579_160 Hb_001579_160 Hb_027411_030--Hb_001579_160 Hb_000991_060 Hb_000991_060 Hb_027411_030--Hb_000991_060 Hb_027411_030--Hb_001141_430 Hb_145975_010 Hb_145975_010 Hb_027411_030--Hb_145975_010 Hb_010863_020--Hb_013399_060 Hb_001257_140 Hb_001257_140 Hb_010863_020--Hb_001257_140 Hb_003858_070 Hb_003858_070 Hb_010863_020--Hb_003858_070 Hb_010863_020--Hb_001296_010 Hb_001006_300 Hb_001006_300 Hb_010863_020--Hb_001006_300 Hb_010217_020 Hb_010217_020 Hb_006618_100--Hb_010217_020 Hb_006618_100--Hb_145975_010 Hb_000349_280 Hb_000349_280 Hb_006618_100--Hb_000349_280 Hb_006618_100--Hb_004757_010 Hb_004158_040 Hb_004158_040 Hb_006618_100--Hb_004158_040 Hb_006618_100--Hb_001579_160 Hb_013399_060--Hb_003858_070 Hb_013399_060--Hb_001006_300 Hb_003598_050 Hb_003598_050 Hb_013399_060--Hb_003598_050 Hb_180088_010 Hb_180088_010 Hb_013399_060--Hb_180088_010 Hb_013399_060--Hb_001296_010 Hb_001296_010--Hb_000991_060 Hb_002030_190 Hb_002030_190 Hb_001296_010--Hb_002030_190 Hb_001296_010--Hb_027411_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 6.40967 3.62671 57.662 0.122792 0.276437
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0987712 0 0 2.44914 5.87274

CAGE analysis