Hb_011344_060

Information

Type -
Description -
Location Contig11344: 37055-39171
Sequence    

Annotation

kegg
ID rcu:RCOM_1679860
description hypothetical protein
nr
ID XP_012087121.1
description PREDICTED: uncharacterized protein LOC105645975 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K043
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20771 PE=4 SV=1
Gene Ontology
ID GO:0044237
description PREDICTED: uncharacterized protein LOC105645975 isoform X2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_060 0.0 - - PREDICTED: uncharacterized protein LOC105645975 isoform X2 [Jatropha curcas]
2 Hb_001437_160 0.2507683522 - - PREDICTED: high-affinity nitrate transporter 2.1-like [Jatropha curcas]
3 Hb_107429_010 0.2769674456 - - PREDICTED: calcium-dependent protein kinase 34 [Jatropha curcas]
4 Hb_000740_020 0.2809034699 transcription factor TF Family: MYB-related asymmetric leaves1 and rough sheath, putative [Ricinus communis]
5 Hb_000363_270 0.3021028685 - - hypothetical protein PRUPE_ppa024846mg [Prunus persica]
6 Hb_001226_010 0.3225571608 transcription factor TF Family: RWP-RK conserved hypothetical protein [Ricinus communis]
7 Hb_000917_170 0.3302188833 - - PREDICTED: clavaminate synthase-like protein At3g21360 [Jatropha curcas]
8 Hb_000836_150 0.3378459552 - - hypothetical protein POPTR_0003s13070g [Populus trichocarpa]
9 Hb_103739_010 0.3445058211 - - sodium/hydrogen exchanger, putative [Ricinus communis]
10 Hb_164255_010 0.3480044155 - - PREDICTED: aspartate-semialdehyde dehydrogenase [Jatropha curcas]
11 Hb_001016_070 0.3514399135 - - PREDICTED: putative MO25-like protein At5g47540 [Jatropha curcas]
12 Hb_026527_040 0.3521905262 - - conserved hypothetical protein [Ricinus communis]
13 Hb_011174_030 0.3548872242 - - -
14 Hb_007441_170 0.3576669692 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
15 Hb_001195_430 0.3685848787 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001817_140 0.3700793576 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
17 Hb_002890_080 0.3782938815 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001439_090 0.3785781815 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001517_040 0.3816036466 - - -
20 Hb_001143_150 0.3829690652 - - PREDICTED: mitochondrial protein import protein MAS5-like [Populus euphratica]

Gene co-expression network

sample Hb_011344_060 Hb_011344_060 Hb_001437_160 Hb_001437_160 Hb_011344_060--Hb_001437_160 Hb_107429_010 Hb_107429_010 Hb_011344_060--Hb_107429_010 Hb_000740_020 Hb_000740_020 Hb_011344_060--Hb_000740_020 Hb_000363_270 Hb_000363_270 Hb_011344_060--Hb_000363_270 Hb_001226_010 Hb_001226_010 Hb_011344_060--Hb_001226_010 Hb_000917_170 Hb_000917_170 Hb_011344_060--Hb_000917_170 Hb_001437_160--Hb_000740_020 Hb_001437_160--Hb_107429_010 Hb_000836_150 Hb_000836_150 Hb_001437_160--Hb_000836_150 Hb_001437_160--Hb_001226_010 Hb_103739_010 Hb_103739_010 Hb_001437_160--Hb_103739_010 Hb_107429_010--Hb_000740_020 Hb_107429_010--Hb_000917_170 Hb_107429_010--Hb_001226_010 Hb_004163_020 Hb_004163_020 Hb_107429_010--Hb_004163_020 Hb_011457_030 Hb_011457_030 Hb_107429_010--Hb_011457_030 Hb_000740_020--Hb_001226_010 Hb_000740_020--Hb_000836_150 Hb_001143_150 Hb_001143_150 Hb_000740_020--Hb_001143_150 Hb_000740_020--Hb_000917_170 Hb_001016_070 Hb_001016_070 Hb_000363_270--Hb_001016_070 Hb_001817_140 Hb_001817_140 Hb_000363_270--Hb_001817_140 Hb_186158_010 Hb_186158_010 Hb_000363_270--Hb_186158_010 Hb_001623_070 Hb_001623_070 Hb_000363_270--Hb_001623_070 Hb_002259_140 Hb_002259_140 Hb_000363_270--Hb_002259_140 Hb_001911_070 Hb_001911_070 Hb_000363_270--Hb_001911_070 Hb_001322_030 Hb_001322_030 Hb_001226_010--Hb_001322_030 Hb_034904_010 Hb_034904_010 Hb_001226_010--Hb_034904_010 Hb_001226_010--Hb_103739_010 Hb_007145_010 Hb_007145_010 Hb_001226_010--Hb_007145_010 Hb_000703_040 Hb_000703_040 Hb_000917_170--Hb_000703_040 Hb_000917_170--Hb_004163_020 Hb_000175_150 Hb_000175_150 Hb_000917_170--Hb_000175_150 Hb_000917_170--Hb_011457_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.102168 0.0854133 0 0.055669
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.228075 0 0 0

CAGE analysis