Hb_011344_140

Information

Type -
Description -
Location Contig11344: 123185-126199
Sequence    

Annotation

kegg
ID rcu:RCOM_1679920
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012087109.1
description PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
swissprot
ID Q9SD85
description Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1
trembl
ID A0A067JRY9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20764 PE=3 SV=1
Gene Ontology
ID GO:0005506
description geraniol 8-hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04006: 123203-126184
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011344_140 0.0 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
2 Hb_002045_220 0.0809940105 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
3 Hb_001907_020 0.0814538524 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
4 Hb_010921_060 0.1038604094 - - ATP binding protein, putative [Ricinus communis]
5 Hb_000465_380 0.1074983936 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
6 Hb_000412_090 0.110896416 - - receptor serine/threonine kinase, putative [Ricinus communis]
7 Hb_000649_280 0.114158428 - - PREDICTED: F-box protein PP2-B10-like [Pyrus x bretschneideri]
8 Hb_026053_030 0.1142998208 - - PREDICTED: uncharacterized protein LOC105629587 [Jatropha curcas]
9 Hb_002239_020 0.1180153965 - - MLO, putative [Theobroma cacao]
10 Hb_009803_030 0.1227632337 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
11 Hb_000668_160 0.126004727 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
12 Hb_000563_120 0.1266312168 - - hypothetical protein JCGZ_18936 [Jatropha curcas]
13 Hb_007420_010 0.1266508052 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
14 Hb_000044_050 0.1289555051 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
15 Hb_000377_160 0.134300958 - - PREDICTED: oligopeptide transporter 3 [Jatropha curcas]
16 Hb_000819_010 0.1390361137 - - Receptor-like protein kinase 1, putative [Theobroma cacao]
17 Hb_108055_010 0.1396351519 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_129399_010 0.1459245607 - - cytochrome P450, putative [Ricinus communis]
19 Hb_004007_230 0.1463762486 - - PREDICTED: putative formamidase C869.04 isoform X1 [Jatropha curcas]
20 Hb_008195_020 0.1487933167 - - Vacuolar-processing enzyme precursor [Ricinus communis]

Gene co-expression network

sample Hb_011344_140 Hb_011344_140 Hb_002045_220 Hb_002045_220 Hb_011344_140--Hb_002045_220 Hb_001907_020 Hb_001907_020 Hb_011344_140--Hb_001907_020 Hb_010921_060 Hb_010921_060 Hb_011344_140--Hb_010921_060 Hb_000465_380 Hb_000465_380 Hb_011344_140--Hb_000465_380 Hb_000412_090 Hb_000412_090 Hb_011344_140--Hb_000412_090 Hb_000649_280 Hb_000649_280 Hb_011344_140--Hb_000649_280 Hb_002045_220--Hb_000412_090 Hb_002045_220--Hb_010921_060 Hb_004007_230 Hb_004007_230 Hb_002045_220--Hb_004007_230 Hb_002045_220--Hb_000465_380 Hb_002045_220--Hb_001907_020 Hb_022108_010 Hb_022108_010 Hb_001907_020--Hb_022108_010 Hb_001907_020--Hb_000649_280 Hb_004055_100 Hb_004055_100 Hb_001907_020--Hb_004055_100 Hb_026053_030 Hb_026053_030 Hb_001907_020--Hb_026053_030 Hb_002239_020 Hb_002239_020 Hb_010921_060--Hb_002239_020 Hb_000819_010 Hb_000819_010 Hb_010921_060--Hb_000819_010 Hb_010921_060--Hb_000465_380 Hb_000668_160 Hb_000668_160 Hb_010921_060--Hb_000668_160 Hb_000521_290 Hb_000521_290 Hb_010921_060--Hb_000521_290 Hb_000029_180 Hb_000029_180 Hb_000465_380--Hb_000029_180 Hb_108055_010 Hb_108055_010 Hb_000465_380--Hb_108055_010 Hb_030370_070 Hb_030370_070 Hb_000465_380--Hb_030370_070 Hb_129399_010 Hb_129399_010 Hb_000465_380--Hb_129399_010 Hb_000465_380--Hb_002239_020 Hb_000685_130 Hb_000685_130 Hb_000412_090--Hb_000685_130 Hb_001515_030 Hb_001515_030 Hb_000412_090--Hb_001515_030 Hb_005569_030 Hb_005569_030 Hb_000412_090--Hb_005569_030 Hb_007420_010 Hb_007420_010 Hb_000412_090--Hb_007420_010 Hb_000377_160 Hb_000377_160 Hb_000649_280--Hb_000377_160 Hb_003767_010 Hb_003767_010 Hb_000649_280--Hb_003767_010 Hb_000563_120 Hb_000563_120 Hb_000649_280--Hb_000563_120 Hb_000649_280--Hb_007420_010 Hb_123560_050 Hb_123560_050 Hb_000649_280--Hb_123560_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0534154 105.845 17.39 15.2803 0.0430878 0.04188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 40.1274 45.636

CAGE analysis