Hb_011358_010

Information

Type -
Description -
Location Contig11358: 432-957
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011358_010 0.0 - - -
2 Hb_112791_030 0.0365669558 - - Uncharacterized protein TCM_027940 [Theobroma cacao]
3 Hb_145080_010 0.0408630532 - - PREDICTED: uncharacterized protein LOC105643750 [Jatropha curcas]
4 Hb_037519_010 0.0765049283 - - PREDICTED: auxin-induced in root cultures protein 12-like [Jatropha curcas]
5 Hb_011432_010 0.0829232525 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
6 Hb_002973_130 0.0997895112 - - PREDICTED: uncharacterized protein LOC104609908 [Nelumbo nucifera]
7 Hb_000193_090 0.1189625512 - - cysteine protease, putative [Ricinus communis]
8 Hb_002876_280 0.1410285728 - - hypothetical protein RCOM_0686540 [Ricinus communis]
9 Hb_007590_030 0.141087544 - - PREDICTED: iridoid synthase [Jatropha curcas]
10 Hb_125181_010 0.1426313614 - - PREDICTED: uncharacterized protein LOC104115096 [Nicotiana tomentosiformis]
11 Hb_006351_120 0.1455079361 - - hypothetical protein CICLE_v10030803mg [Citrus clementina]
12 Hb_002447_100 0.147444017 - - hypothetical protein POPTR_0009s06260g [Populus trichocarpa]
13 Hb_007295_020 0.1504912574 - - Uncharacterized protein TCM_034658 [Theobroma cacao]
14 Hb_016734_040 0.1550011197 - - abhydrolase domain containing, putative [Ricinus communis]
15 Hb_001355_060 0.1612528755 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
16 Hb_000207_240 0.1674630207 - - hypothetical protein RCOM_0686540 [Ricinus communis]
17 Hb_000856_210 0.1681575348 - - nitrate transporter, putative [Ricinus communis]
18 Hb_001221_250 0.1696654661 - - -
19 Hb_149345_010 0.1775411036 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
20 Hb_016564_050 0.1780979972 - - -

Gene co-expression network

sample Hb_011358_010 Hb_011358_010 Hb_112791_030 Hb_112791_030 Hb_011358_010--Hb_112791_030 Hb_145080_010 Hb_145080_010 Hb_011358_010--Hb_145080_010 Hb_037519_010 Hb_037519_010 Hb_011358_010--Hb_037519_010 Hb_011432_010 Hb_011432_010 Hb_011358_010--Hb_011432_010 Hb_002973_130 Hb_002973_130 Hb_011358_010--Hb_002973_130 Hb_000193_090 Hb_000193_090 Hb_011358_010--Hb_000193_090 Hb_112791_030--Hb_145080_010 Hb_112791_030--Hb_011432_010 Hb_112791_030--Hb_037519_010 Hb_112791_030--Hb_002973_130 Hb_007295_020 Hb_007295_020 Hb_112791_030--Hb_007295_020 Hb_145080_010--Hb_011432_010 Hb_145080_010--Hb_037519_010 Hb_145080_010--Hb_007295_020 Hb_145080_010--Hb_002973_130 Hb_037519_010--Hb_011432_010 Hb_037519_010--Hb_002973_130 Hb_002876_280 Hb_002876_280 Hb_037519_010--Hb_002876_280 Hb_011432_010--Hb_002973_130 Hb_011432_010--Hb_002876_280 Hb_002973_130--Hb_002876_280 Hb_001221_250 Hb_001221_250 Hb_000193_090--Hb_001221_250 Hb_007590_030 Hb_007590_030 Hb_000193_090--Hb_007590_030 Hb_125181_010 Hb_125181_010 Hb_000193_090--Hb_125181_010 Hb_004291_060 Hb_004291_060 Hb_000193_090--Hb_004291_060 Hb_000193_090--Hb_112791_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.729852 0 0.969225 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.376042 2.56355

CAGE analysis