Hb_011360_010

Information

Type -
Description -
Location Contig11360: 1268-2140
Sequence    

Annotation

kegg
ID mdm:103436821
description uncharacterized LOC103436821
nr
ID XP_009765107.1
description PREDICTED: uncharacterized protein LOC104216696 [Nicotiana sylvestris]
swissprot
ID -
description -
trembl
ID W9S6E9
description Uncharacterized protein OS=Morus notabilis GN=L484_006992 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011360_010 0.0 - - PREDICTED: uncharacterized protein LOC104216696 [Nicotiana sylvestris]
2 Hb_000339_070 0.1553864516 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Populus euphratica]
3 Hb_000729_060 0.1760629051 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005031_070 0.2149132318 - - RecName: Full=Major latex allergen Hev b 5; AltName: Allergen=Hev b 5 [Hevea brasiliensis]
5 Hb_048985_010 0.2152865816 - - -
6 Hb_007245_090 0.2251409442 - - -
7 Hb_005214_110 0.2311784944 - - -
8 Hb_004223_230 0.2359434961 transcription factor TF Family: ARF PREDICTED: auxin response factor 5 isoform X1 [Jatropha curcas]
9 Hb_016604_020 0.2360438311 - - -
10 Hb_019762_010 0.2372330692 - - hypothetical protein JCGZ_12062 [Jatropha curcas]
11 Hb_000116_470 0.2380573175 - - PREDICTED: AT-hook motif nuclear-localized protein 10-like [Jatropha curcas]
12 Hb_163950_010 0.2397318612 - - -
13 Hb_000014_100 0.2398192378 - - -
14 Hb_000124_020 0.2401156991 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
15 Hb_000402_200 0.2401159783 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
16 Hb_000291_210 0.2402299454 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
17 Hb_000326_010 0.2449110615 - - hypothetical protein POPTR_0009s11870g [Populus trichocarpa]
18 Hb_005333_130 0.2452610223 - - conserved hypothetical protein [Ricinus communis]
19 Hb_010680_010 0.2455127233 - - -
20 Hb_000350_090 0.2473921912 transcription factor TF Family: GeBP transcription regulator, putative [Ricinus communis]

Gene co-expression network

sample Hb_011360_010 Hb_011360_010 Hb_000339_070 Hb_000339_070 Hb_011360_010--Hb_000339_070 Hb_000729_060 Hb_000729_060 Hb_011360_010--Hb_000729_060 Hb_005031_070 Hb_005031_070 Hb_011360_010--Hb_005031_070 Hb_048985_010 Hb_048985_010 Hb_011360_010--Hb_048985_010 Hb_007245_090 Hb_007245_090 Hb_011360_010--Hb_007245_090 Hb_005214_110 Hb_005214_110 Hb_011360_010--Hb_005214_110 Hb_000339_070--Hb_007245_090 Hb_000339_070--Hb_005031_070 Hb_002849_210 Hb_002849_210 Hb_000339_070--Hb_002849_210 Hb_000339_070--Hb_005214_110 Hb_004223_230 Hb_004223_230 Hb_000339_070--Hb_004223_230 Hb_000116_470 Hb_000116_470 Hb_000339_070--Hb_000116_470 Hb_000402_200 Hb_000402_200 Hb_000729_060--Hb_000402_200 Hb_000085_310 Hb_000085_310 Hb_000729_060--Hb_000085_310 Hb_000729_060--Hb_000339_070 Hb_000729_060--Hb_048985_010 Hb_008453_020 Hb_008453_020 Hb_000729_060--Hb_008453_020 Hb_000014_100 Hb_000014_100 Hb_000729_060--Hb_000014_100 Hb_005031_070--Hb_004223_230 Hb_004012_010 Hb_004012_010 Hb_005031_070--Hb_004012_010 Hb_002783_230 Hb_002783_230 Hb_005031_070--Hb_002783_230 Hb_002918_280 Hb_002918_280 Hb_005031_070--Hb_002918_280 Hb_169246_010 Hb_169246_010 Hb_005031_070--Hb_169246_010 Hb_000155_190 Hb_000155_190 Hb_048985_010--Hb_000155_190 Hb_000977_080 Hb_000977_080 Hb_048985_010--Hb_000977_080 Hb_000622_310 Hb_000622_310 Hb_048985_010--Hb_000622_310 Hb_000189_270 Hb_000189_270 Hb_048985_010--Hb_000189_270 Hb_004884_220 Hb_004884_220 Hb_048985_010--Hb_004884_220 Hb_021068_050 Hb_021068_050 Hb_048985_010--Hb_021068_050 Hb_007245_090--Hb_000014_100 Hb_007245_090--Hb_005214_110 Hb_001930_070 Hb_001930_070 Hb_007245_090--Hb_001930_070 Hb_006499_010 Hb_006499_010 Hb_007245_090--Hb_006499_010 Hb_004882_020 Hb_004882_020 Hb_007245_090--Hb_004882_020 Hb_005214_110--Hb_001930_070 Hb_001158_030 Hb_001158_030 Hb_005214_110--Hb_001158_030 Hb_005214_110--Hb_000014_100 Hb_001186_060 Hb_001186_060 Hb_005214_110--Hb_001186_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.22228 0.180528 0 0.0576354 0.433007 0.0542035
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.211583 0.499079 0.299992 0.0224718 0

CAGE analysis