Hb_011360_100

Information

Type -
Description -
Location Contig11360: 50653-52200
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011360_100 0.0 - - -
2 Hb_004458_050 0.0139900847 - - -
3 Hb_059069_010 0.0167076207 - - PREDICTED: uncharacterized protein LOC105180180, partial [Sesamum indicum]
4 Hb_038675_010 0.017828253 - - PREDICTED: uncharacterized protein LOC105155307, partial [Sesamum indicum]
5 Hb_005741_010 0.0187355231 - - PREDICTED: uncharacterized protein LOC105775353 [Gossypium raimondii]
6 Hb_012194_010 0.0313298226 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
7 Hb_006275_030 0.0535029578 - - -
8 Hb_000574_020 0.0565649262 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
9 Hb_000195_050 0.0567934939 - - -
10 Hb_002463_080 0.0643186248 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_003556_020 0.0675561511 - - PREDICTED: non-specific lipid-transfer protein D, cotyledon-specific isoform-like [Citrus sinensis]
12 Hb_000563_290 0.0909321539 - - non-ltr retroelement reverse transcriptase [Rosa rugosa]
13 Hb_010222_010 0.1150238623 - - -
14 Hb_000188_090 0.1182934251 - - JHL22C18.10 [Jatropha curcas]
15 Hb_000934_220 0.1240057756 - - PREDICTED: uncharacterized protein LOC104890722 [Beta vulgaris subsp. vulgaris]
16 Hb_001887_030 0.1438312389 - - -
17 Hb_044767_010 0.1468460341 - - -
18 Hb_002490_040 0.1490241292 - - 20S proteasome beta subunit C2 [Hevea brasiliensis]
19 Hb_066620_010 0.1497007519 - - hypothetical protein JCGZ_08269 [Jatropha curcas]
20 Hb_004429_040 0.1565187237 - - -

Gene co-expression network

sample Hb_011360_100 Hb_011360_100 Hb_004458_050 Hb_004458_050 Hb_011360_100--Hb_004458_050 Hb_059069_010 Hb_059069_010 Hb_011360_100--Hb_059069_010 Hb_038675_010 Hb_038675_010 Hb_011360_100--Hb_038675_010 Hb_005741_010 Hb_005741_010 Hb_011360_100--Hb_005741_010 Hb_012194_010 Hb_012194_010 Hb_011360_100--Hb_012194_010 Hb_006275_030 Hb_006275_030 Hb_011360_100--Hb_006275_030 Hb_004458_050--Hb_005741_010 Hb_004458_050--Hb_012194_010 Hb_004458_050--Hb_059069_010 Hb_004458_050--Hb_038675_010 Hb_004458_050--Hb_006275_030 Hb_059069_010--Hb_038675_010 Hb_059069_010--Hb_005741_010 Hb_000195_050 Hb_000195_050 Hb_059069_010--Hb_000195_050 Hb_059069_010--Hb_012194_010 Hb_038675_010--Hb_005741_010 Hb_038675_010--Hb_000195_050 Hb_038675_010--Hb_012194_010 Hb_005741_010--Hb_012194_010 Hb_005741_010--Hb_006275_030 Hb_012194_010--Hb_006275_030 Hb_000574_020 Hb_000574_020 Hb_012194_010--Hb_000574_020 Hb_002463_080 Hb_002463_080 Hb_012194_010--Hb_002463_080 Hb_006275_030--Hb_000574_020 Hb_006275_030--Hb_002463_080 Hb_003556_020 Hb_003556_020 Hb_006275_030--Hb_003556_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0370395 0 0 0 0 0.0715391
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis