Hb_011362_010

Information

Type -
Description -
Location Contig11362: 69-3633
Sequence    

Annotation

kegg
ID egr:104455256
description putative receptor-like protein kinase At3g47110
nr
ID KDP31584.1
description hypothetical protein JCGZ_14809 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067KIB5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14809 PE=4 SV=1
Gene Ontology
ID GO:0016021
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04103: 434-2169 , PASA_asmbl_04104: 2190-3233
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011362_010 0.0 - - hypothetical protein JCGZ_14809 [Jatropha curcas]
2 Hb_000268_050 0.0488631328 - - PREDICTED: tetrapyrrole-binding protein, chloroplastic [Jatropha curcas]
3 Hb_002329_050 0.0539120949 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000540_080 0.0570240226 - - PREDICTED: laccase-17 [Jatropha curcas]
5 Hb_000883_080 0.0626293274 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_000160_120 0.0628726852 - - conserved hypothetical protein [Ricinus communis]
7 Hb_096907_010 0.0634756692 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
8 Hb_001437_170 0.0658722817 - - hypothetical protein POPTR_0009s01390g [Populus trichocarpa]
9 Hb_000115_030 0.0701547122 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 42 [Jatropha curcas]
10 Hb_005483_040 0.0734277112 - - PREDICTED: mechanosensitive ion channel protein 10-like [Jatropha curcas]
11 Hb_005062_100 0.0742305277 - - Ferredoxin-2, chloroplast precursor, putative [Ricinus communis]
12 Hb_000363_070 0.0757317425 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003528_100 0.0779011543 - - beta-1,3-glucuronyltransferase, putative [Ricinus communis]
14 Hb_006718_030 0.0792566797 - - ATPase, F1 complex, gamma subunit protein [Theobroma cacao]
15 Hb_002250_040 0.0796371971 - - PREDICTED: transcription repressor OFP17 [Jatropha curcas]
16 Hb_045260_010 0.0797763207 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
17 Hb_144550_010 0.0808670497 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
18 Hb_002973_060 0.0814672421 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005228_050 0.0817101024 - - PREDICTED: uncharacterized protein LOC104896168 [Beta vulgaris subsp. vulgaris]
20 Hb_000724_040 0.0818265749 transcription factor TF Family: MIKC PREDICTED: MADS-box protein CMB1-like [Jatropha curcas]

Gene co-expression network

sample Hb_011362_010 Hb_011362_010 Hb_000268_050 Hb_000268_050 Hb_011362_010--Hb_000268_050 Hb_002329_050 Hb_002329_050 Hb_011362_010--Hb_002329_050 Hb_000540_080 Hb_000540_080 Hb_011362_010--Hb_000540_080 Hb_000883_080 Hb_000883_080 Hb_011362_010--Hb_000883_080 Hb_000160_120 Hb_000160_120 Hb_011362_010--Hb_000160_120 Hb_096907_010 Hb_096907_010 Hb_011362_010--Hb_096907_010 Hb_000268_050--Hb_002329_050 Hb_003528_100 Hb_003528_100 Hb_000268_050--Hb_003528_100 Hb_000268_050--Hb_000160_120 Hb_001437_170 Hb_001437_170 Hb_000268_050--Hb_001437_170 Hb_000268_050--Hb_096907_010 Hb_002329_050--Hb_000883_080 Hb_005483_040 Hb_005483_040 Hb_002329_050--Hb_005483_040 Hb_018487_040 Hb_018487_040 Hb_002329_050--Hb_018487_040 Hb_000928_260 Hb_000928_260 Hb_002329_050--Hb_000928_260 Hb_045260_010 Hb_045260_010 Hb_000540_080--Hb_045260_010 Hb_000363_070 Hb_000363_070 Hb_000540_080--Hb_000363_070 Hb_005228_050 Hb_005228_050 Hb_000540_080--Hb_005228_050 Hb_000724_040 Hb_000724_040 Hb_000540_080--Hb_000724_040 Hb_000540_080--Hb_000160_120 Hb_000883_080--Hb_000928_260 Hb_000883_080--Hb_005483_040 Hb_000883_080--Hb_018487_040 Hb_006718_030 Hb_006718_030 Hb_000883_080--Hb_006718_030 Hb_000160_120--Hb_001437_170 Hb_000160_120--Hb_096907_010 Hb_000160_120--Hb_003528_100 Hb_000115_030 Hb_000115_030 Hb_000160_120--Hb_000115_030 Hb_065774_010 Hb_065774_010 Hb_000160_120--Hb_065774_010 Hb_002391_340 Hb_002391_340 Hb_000160_120--Hb_002391_340 Hb_096907_010--Hb_001437_170 Hb_096907_010--Hb_000115_030 Hb_096907_010--Hb_003528_100 Hb_096907_010--Hb_002391_340 Hb_096907_010--Hb_065774_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.118549 2.08824 4.65601 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 10.8533

CAGE analysis