Hb_011364_020

Information

Type -
Description -
Location Contig11364: 25446-30373
Sequence    

Annotation

kegg
ID rcu:RCOM_1282690
description Ubiquinone biosynthesis protein coq-8, putative
nr
ID XP_012082195.1
description PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
swissprot
ID Q9MA15
description Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thaliana GN=At1g79600 PE=2 SV=1
trembl
ID A0A067JYQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16406 PE=4 SV=1
Gene Ontology
ID GO:0004672
description uncharacterized aarf domain-containing protein kinase chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04106: 25516-30259
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011364_020 0.0 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
2 Hb_023988_030 0.09256116 - - PREDICTED: transmembrane protein 19 [Vitis vinifera]
3 Hb_009178_060 0.09373791 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_005571_010 0.1038512491 - - PREDICTED: 15-cis-phytoene desaturase, chloroplastic/chromoplastic [Jatropha curcas]
5 Hb_001421_090 0.1074138601 - - hypothetical protein RCOM_1278080 [Ricinus communis]
6 Hb_001105_100 0.1088089827 - - PREDICTED: cathepsin B [Jatropha curcas]
7 Hb_030959_010 0.1104092704 - - cullin, putative [Ricinus communis]
8 Hb_002150_020 0.1114257204 - - PREDICTED: translation initiation factor IF-2, mitochondrial isoform X1 [Jatropha curcas]
9 Hb_001677_220 0.1118058342 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
10 Hb_003142_010 0.1118970545 transcription factor TF Family: SET PREDICTED: LOW QUALITY PROTEIN: histone-lysine N-methyltransferase ATX5-like [Populus euphratica]
11 Hb_001009_260 0.1127173939 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X1 [Jatropha curcas]
12 Hb_004735_020 0.1131405833 - - PREDICTED: uncharacterized protein LOC105639315 [Jatropha curcas]
13 Hb_000629_070 0.1134414201 - - DNA-3-methyladenine glycosylase, putative [Ricinus communis]
14 Hb_007313_040 0.1134628466 - - hypothetical protein JCGZ_23401 [Jatropha curcas]
15 Hb_004957_030 0.1136869077 - - hydroxyproline-rich glycoprotein [Populus trichocarpa]
16 Hb_001998_150 0.1141725541 - - hypothetical protein JCGZ_09140 [Jatropha curcas]
17 Hb_000803_320 0.1143439612 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX4 [Jatropha curcas]
18 Hb_000025_500 0.1143787323 - - Ran GTPase binding protein, putative [Ricinus communis]
19 Hb_055690_010 0.1143815772 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
20 Hb_005914_040 0.1162372301 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]

Gene co-expression network

sample Hb_011364_020 Hb_011364_020 Hb_023988_030 Hb_023988_030 Hb_011364_020--Hb_023988_030 Hb_009178_060 Hb_009178_060 Hb_011364_020--Hb_009178_060 Hb_005571_010 Hb_005571_010 Hb_011364_020--Hb_005571_010 Hb_001421_090 Hb_001421_090 Hb_011364_020--Hb_001421_090 Hb_001105_100 Hb_001105_100 Hb_011364_020--Hb_001105_100 Hb_030959_010 Hb_030959_010 Hb_011364_020--Hb_030959_010 Hb_023988_030--Hb_005571_010 Hb_005914_040 Hb_005914_040 Hb_023988_030--Hb_005914_040 Hb_055690_010 Hb_055690_010 Hb_023988_030--Hb_055690_010 Hb_106890_010 Hb_106890_010 Hb_023988_030--Hb_106890_010 Hb_001677_220 Hb_001677_220 Hb_023988_030--Hb_001677_220 Hb_005511_150 Hb_005511_150 Hb_009178_060--Hb_005511_150 Hb_002232_390 Hb_002232_390 Hb_009178_060--Hb_002232_390 Hb_000803_320 Hb_000803_320 Hb_009178_060--Hb_000803_320 Hb_009178_060--Hb_005914_040 Hb_005250_010 Hb_005250_010 Hb_009178_060--Hb_005250_010 Hb_002150_020 Hb_002150_020 Hb_005571_010--Hb_002150_020 Hb_005571_010--Hb_106890_010 Hb_003355_010 Hb_003355_010 Hb_005571_010--Hb_003355_010 Hb_005571_010--Hb_005914_040 Hb_005571_010--Hb_055690_010 Hb_000617_250 Hb_000617_250 Hb_001421_090--Hb_000617_250 Hb_024184_010 Hb_024184_010 Hb_001421_090--Hb_024184_010 Hb_001439_070 Hb_001439_070 Hb_001421_090--Hb_001439_070 Hb_000300_510 Hb_000300_510 Hb_001421_090--Hb_000300_510 Hb_000538_280 Hb_000538_280 Hb_001421_090--Hb_000538_280 Hb_001421_090--Hb_005914_040 Hb_000909_080 Hb_000909_080 Hb_001105_100--Hb_000909_080 Hb_004111_030 Hb_004111_030 Hb_001105_100--Hb_004111_030 Hb_001105_100--Hb_055690_010 Hb_003440_020 Hb_003440_020 Hb_001105_100--Hb_003440_020 Hb_000167_120 Hb_000167_120 Hb_001105_100--Hb_000167_120 Hb_001571_060 Hb_001571_060 Hb_001105_100--Hb_001571_060 Hb_005116_140 Hb_005116_140 Hb_030959_010--Hb_005116_140 Hb_000120_860 Hb_000120_860 Hb_030959_010--Hb_000120_860 Hb_009252_010 Hb_009252_010 Hb_030959_010--Hb_009252_010 Hb_009674_050 Hb_009674_050 Hb_030959_010--Hb_009674_050 Hb_000417_170 Hb_000417_170 Hb_030959_010--Hb_000417_170 Hb_002611_010 Hb_002611_010 Hb_030959_010--Hb_002611_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.32401 7.63962 5.95216 11.6261 2.86477 5.72043
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.47255 5.34742 3.44353 8.08052 22.7615

CAGE analysis