Hb_011381_050

Information

Type -
Description -
Location Contig11381: 18954-19499
Sequence    

Annotation

kegg
ID rcu:RCOM_0920050
description hypothetical protein
nr
ID XP_012076374.1
description PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
swissprot
ID Q9FHH5
description Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1
trembl
ID A0A067KMF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07046 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011381_050 0.0 - - PREDICTED: protein GLUTAMINE DUMPER 5-like [Jatropha curcas]
2 Hb_115572_010 0.0451653948 - - PREDICTED: beta-galactosidase 6 [Jatropha curcas]
3 Hb_002186_110 0.0748544152 - - hypothetical protein CICLE_v10024045mg, partial [Citrus clementina]
4 Hb_009117_020 0.0801892195 - - RALF-LIKE 32 family protein [Populus trichocarpa]
5 Hb_001401_120 0.0909668967 - - hypothetical protein JCGZ_04273 [Jatropha curcas]
6 Hb_036520_030 0.0913142632 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
7 Hb_000197_260 0.0952058097 - - hypothetical protein PRUPE_ppa025448mg [Prunus persica]
8 Hb_133492_010 0.0958261818 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_002388_070 0.0959104755 - - ring finger protein, putative [Ricinus communis]
10 Hb_001936_120 0.0993526609 - - PREDICTED: uncharacterized protein LOC105644623 isoform X1 [Jatropha curcas]
11 Hb_000599_160 0.0994712169 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
12 Hb_002997_150 0.10054226 - - hypothetical protein RCOM_1406750 [Ricinus communis]
13 Hb_004032_290 0.1014341836 - - protein binding protein, putative [Ricinus communis]
14 Hb_000083_200 0.1015100469 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004020_030 0.1016140652 - - Magnesium and cobalt efflux protein corC, putative [Ricinus communis]
16 Hb_180980_010 0.1016188095 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Malus domestica]
17 Hb_007579_030 0.1039986809 - - receptor protein kinase, putative [Ricinus communis]
18 Hb_148262_010 0.104936112 - - conserved hypothetical protein [Ricinus communis]
19 Hb_100732_020 0.105952943 - - hypothetical protein POPTR_0001s15930g [Populus trichocarpa]
20 Hb_003032_110 0.1078238835 - - -

Gene co-expression network

sample Hb_011381_050 Hb_011381_050 Hb_115572_010 Hb_115572_010 Hb_011381_050--Hb_115572_010 Hb_002186_110 Hb_002186_110 Hb_011381_050--Hb_002186_110 Hb_009117_020 Hb_009117_020 Hb_011381_050--Hb_009117_020 Hb_001401_120 Hb_001401_120 Hb_011381_050--Hb_001401_120 Hb_036520_030 Hb_036520_030 Hb_011381_050--Hb_036520_030 Hb_000197_260 Hb_000197_260 Hb_011381_050--Hb_000197_260 Hb_115572_010--Hb_009117_020 Hb_000083_200 Hb_000083_200 Hb_115572_010--Hb_000083_200 Hb_001349_040 Hb_001349_040 Hb_115572_010--Hb_001349_040 Hb_115572_010--Hb_002186_110 Hb_115572_010--Hb_001401_120 Hb_002186_110--Hb_000197_260 Hb_152914_010 Hb_152914_010 Hb_002186_110--Hb_152914_010 Hb_000172_450 Hb_000172_450 Hb_002186_110--Hb_000172_450 Hb_180980_010 Hb_180980_010 Hb_002186_110--Hb_180980_010 Hb_009117_020--Hb_001401_120 Hb_148262_010 Hb_148262_010 Hb_009117_020--Hb_148262_010 Hb_005614_020 Hb_005614_020 Hb_009117_020--Hb_005614_020 Hb_026124_020 Hb_026124_020 Hb_009117_020--Hb_026124_020 Hb_001401_120--Hb_148262_010 Hb_001401_120--Hb_026124_020 Hb_007579_030 Hb_007579_030 Hb_001401_120--Hb_007579_030 Hb_029238_040 Hb_029238_040 Hb_001401_120--Hb_029238_040 Hb_001366_300 Hb_001366_300 Hb_001401_120--Hb_001366_300 Hb_004032_290 Hb_004032_290 Hb_036520_030--Hb_004032_290 Hb_001408_080 Hb_001408_080 Hb_036520_030--Hb_001408_080 Hb_001427_100 Hb_001427_100 Hb_036520_030--Hb_001427_100 Hb_002874_200 Hb_002874_200 Hb_036520_030--Hb_002874_200 Hb_003466_010 Hb_003466_010 Hb_036520_030--Hb_003466_010 Hb_010164_030 Hb_010164_030 Hb_036520_030--Hb_010164_030 Hb_005183_070 Hb_005183_070 Hb_000197_260--Hb_005183_070 Hb_000197_260--Hb_152914_010 Hb_029665_010 Hb_029665_010 Hb_000197_260--Hb_029665_010 Hb_001680_050 Hb_001680_050 Hb_000197_260--Hb_001680_050 Hb_000197_260--Hb_007579_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.40959 5.46658 35.0747 0.0940136 0.0447188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.264614 12.7294

CAGE analysis