Hb_011381_100

Information

Type -
Description -
Location Contig11381: 55400-56332
Sequence    

Annotation

kegg
ID rcu:RCOM_0920290
description lipid binding protein, putative
nr
ID XP_012076380.1
description PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
swissprot
ID F4JSE7
description Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana GN=EDR2 PE=2 SV=1
trembl
ID A0A067KMG3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07051 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011381_100 0.0 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Jatropha curcas]
2 Hb_029866_040 0.0748830128 - - PREDICTED: plastid division protein PDV1 [Jatropha curcas]
3 Hb_000377_060 0.0763454357 - - ARF GTPase activator, putative [Ricinus communis]
4 Hb_003055_120 0.0834277594 - - Protein C20orf11, putative [Ricinus communis]
5 Hb_005431_010 0.0917112686 - - PREDICTED: glycine cleavage system H protein 2, mitochondrial [Jatropha curcas]
6 Hb_000510_320 0.0991560287 - - PREDICTED: uncharacterized protein LOC105649907 [Jatropha curcas]
7 Hb_000009_160 0.1020308276 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]
8 Hb_002874_190 0.1031178301 - - proteasome subunit beta type 6,9, putative [Ricinus communis]
9 Hb_005333_130 0.1048833722 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000479_010 0.1048944485 - - PREDICTED: 40S ribosomal protein S19-3-like [Eucalyptus grandis]
11 Hb_000482_010 0.1065011006 - - PREDICTED: probable ADP,ATP carrier protein At5g56450 [Jatropha curcas]
12 Hb_021409_030 0.1078588489 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X3 [Jatropha curcas]
13 Hb_138585_060 0.1089261856 - - PREDICTED: uncharacterized protein LOC105648743 [Jatropha curcas]
14 Hb_008453_090 0.1097919202 - - hypothetical protein JCGZ_08177 [Jatropha curcas]
15 Hb_000988_080 0.1099531088 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
16 Hb_004738_040 0.1100610941 - - PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Populus euphratica]
17 Hb_001488_070 0.1119211677 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000001_050 0.1139983119 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
19 Hb_158467_010 0.1149166959 - - transporter, putative [Ricinus communis]
20 Hb_171900_080 0.115676897 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011381_100 Hb_011381_100 Hb_029866_040 Hb_029866_040 Hb_011381_100--Hb_029866_040 Hb_000377_060 Hb_000377_060 Hb_011381_100--Hb_000377_060 Hb_003055_120 Hb_003055_120 Hb_011381_100--Hb_003055_120 Hb_005431_010 Hb_005431_010 Hb_011381_100--Hb_005431_010 Hb_000510_320 Hb_000510_320 Hb_011381_100--Hb_000510_320 Hb_000009_160 Hb_000009_160 Hb_011381_100--Hb_000009_160 Hb_029866_040--Hb_000377_060 Hb_029866_040--Hb_005431_010 Hb_000001_050 Hb_000001_050 Hb_029866_040--Hb_000001_050 Hb_001109_020 Hb_001109_020 Hb_029866_040--Hb_001109_020 Hb_029866_040--Hb_000009_160 Hb_000377_060--Hb_001109_020 Hb_003018_190 Hb_003018_190 Hb_000377_060--Hb_003018_190 Hb_003632_010 Hb_003632_010 Hb_000377_060--Hb_003632_010 Hb_008311_010 Hb_008311_010 Hb_000377_060--Hb_008311_010 Hb_002874_190 Hb_002874_190 Hb_003055_120--Hb_002874_190 Hb_000988_080 Hb_000988_080 Hb_003055_120--Hb_000988_080 Hb_003687_110 Hb_003687_110 Hb_003055_120--Hb_003687_110 Hb_012762_050 Hb_012762_050 Hb_003055_120--Hb_012762_050 Hb_005539_350 Hb_005539_350 Hb_003055_120--Hb_005539_350 Hb_001105_070 Hb_001105_070 Hb_005431_010--Hb_001105_070 Hb_005431_010--Hb_000009_160 Hb_000705_210 Hb_000705_210 Hb_005431_010--Hb_000705_210 Hb_000905_200 Hb_000905_200 Hb_005431_010--Hb_000905_200 Hb_009773_020 Hb_009773_020 Hb_005431_010--Hb_009773_020 Hb_002105_040 Hb_002105_040 Hb_000510_320--Hb_002105_040 Hb_000175_460 Hb_000175_460 Hb_000510_320--Hb_000175_460 Hb_000086_400 Hb_000086_400 Hb_000510_320--Hb_000086_400 Hb_004738_040 Hb_004738_040 Hb_000510_320--Hb_004738_040 Hb_000876_070 Hb_000876_070 Hb_000510_320--Hb_000876_070 Hb_181288_020 Hb_181288_020 Hb_000510_320--Hb_181288_020 Hb_000671_090 Hb_000671_090 Hb_000009_160--Hb_000671_090 Hb_007943_090 Hb_007943_090 Hb_000009_160--Hb_007943_090 Hb_000205_270 Hb_000205_270 Hb_000009_160--Hb_000205_270 Hb_016065_010 Hb_016065_010 Hb_000009_160--Hb_016065_010 Hb_055062_030 Hb_055062_030 Hb_000009_160--Hb_055062_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.1285 15.5964 12.5208 26.182 31.8876 31.7767
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.3398 61.0491 66.1902 11.3337 5.84031

CAGE analysis