Hb_011457_150

Information

Type -
Description -
Location Contig11457: 117342-120716
Sequence    

Annotation

kegg
ID pop:POPTR_0002s05000g
description POPTRDRAFT_849367; hypothetical protein
nr
ID XP_012092179.1
description PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JC34
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21882 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011457_150 0.0 - - PREDICTED: uncharacterized protein LOC105649946 [Jatropha curcas]
2 Hb_002820_030 0.0782065629 - - PREDICTED: uncharacterized protein LOC105638922 [Jatropha curcas]
3 Hb_000424_060 0.0984152023 - - PREDICTED: myosin-15 [Jatropha curcas]
4 Hb_000010_110 0.1094189985 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
5 Hb_000069_380 0.1099520633 transcription factor TF Family: PHD PREDICTED: histone-lysine N-methyltransferase ATX3 isoform X2 [Jatropha curcas]
6 Hb_004586_300 0.1122659457 - - PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic [Jatropha curcas]
7 Hb_002893_040 0.1122746015 - - PREDICTED: carbon catabolite repressor protein 4 homolog 6 isoform X1 [Jatropha curcas]
8 Hb_004724_270 0.1132401485 - - hypothetical protein JCGZ_12706 [Jatropha curcas]
9 Hb_002542_040 0.1147121765 - - hypothetical protein JCGZ_13884 [Jatropha curcas]
10 Hb_001953_070 0.1153267562 - - PREDICTED: RNA pseudouridine synthase 7 isoform X2 [Jatropha curcas]
11 Hb_006059_040 0.1174533742 transcription factor TF Family: SOH1 hypothetical protein PHAVU_007G063000g [Phaseolus vulgaris]
12 Hb_000738_020 0.1186087477 - - zinc finger protein, putative [Ricinus communis]
13 Hb_002553_040 0.1212415973 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
14 Hb_005563_070 0.1213293999 - - PREDICTED: uncharacterized protein LOC105630108 [Jatropha curcas]
15 Hb_010368_010 0.1214060934 - - RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis]
16 Hb_007035_050 0.1220001234 - - PREDICTED: cleavage stimulating factor 64 [Jatropha curcas]
17 Hb_000010_190 0.1236806348 - - PREDICTED: protein-L-isoaspartate O-methyltransferase 1 isoform X2 [Jatropha curcas]
18 Hb_000176_020 0.1239903263 - - PREDICTED: nuclear pore complex protein NUP43 [Jatropha curcas]
19 Hb_000173_310 0.1242452954 - - PREDICTED: uncharacterized protein LOC105631893 isoform X1 [Jatropha curcas]
20 Hb_000522_150 0.124280836 - - PREDICTED: uncharacterized protein LOC105646670 [Jatropha curcas]

Gene co-expression network

sample Hb_011457_150 Hb_011457_150 Hb_002820_030 Hb_002820_030 Hb_011457_150--Hb_002820_030 Hb_000424_060 Hb_000424_060 Hb_011457_150--Hb_000424_060 Hb_000010_110 Hb_000010_110 Hb_011457_150--Hb_000010_110 Hb_000069_380 Hb_000069_380 Hb_011457_150--Hb_000069_380 Hb_004586_300 Hb_004586_300 Hb_011457_150--Hb_004586_300 Hb_002893_040 Hb_002893_040 Hb_011457_150--Hb_002893_040 Hb_000738_020 Hb_000738_020 Hb_002820_030--Hb_000738_020 Hb_012239_020 Hb_012239_020 Hb_002820_030--Hb_012239_020 Hb_002820_030--Hb_000424_060 Hb_002820_030--Hb_000010_110 Hb_002820_030--Hb_000069_380 Hb_003142_030 Hb_003142_030 Hb_000424_060--Hb_003142_030 Hb_000181_090 Hb_000181_090 Hb_000424_060--Hb_000181_090 Hb_001951_200 Hb_001951_200 Hb_000424_060--Hb_001951_200 Hb_007533_010 Hb_007533_010 Hb_000424_060--Hb_007533_010 Hb_000424_060--Hb_000010_110 Hb_002553_040 Hb_002553_040 Hb_000010_110--Hb_002553_040 Hb_001953_070 Hb_001953_070 Hb_000010_110--Hb_001953_070 Hb_003001_080 Hb_003001_080 Hb_000010_110--Hb_003001_080 Hb_000522_150 Hb_000522_150 Hb_000010_110--Hb_000522_150 Hb_005271_220 Hb_005271_220 Hb_000010_110--Hb_005271_220 Hb_002217_110 Hb_002217_110 Hb_000010_110--Hb_002217_110 Hb_006059_040 Hb_006059_040 Hb_000069_380--Hb_006059_040 Hb_000708_030 Hb_000708_030 Hb_000069_380--Hb_000708_030 Hb_000699_030 Hb_000699_030 Hb_000069_380--Hb_000699_030 Hb_001225_040 Hb_001225_040 Hb_000069_380--Hb_001225_040 Hb_010368_010 Hb_010368_010 Hb_000069_380--Hb_010368_010 Hb_001699_220 Hb_001699_220 Hb_000069_380--Hb_001699_220 Hb_004586_300--Hb_006059_040 Hb_002232_410 Hb_002232_410 Hb_004586_300--Hb_002232_410 Hb_004586_300--Hb_000069_380 Hb_002445_060 Hb_002445_060 Hb_004586_300--Hb_002445_060 Hb_001221_110 Hb_001221_110 Hb_004586_300--Hb_001221_110 Hb_000120_170 Hb_000120_170 Hb_004586_300--Hb_000120_170 Hb_001258_100 Hb_001258_100 Hb_002893_040--Hb_001258_100 Hb_002413_010 Hb_002413_010 Hb_002893_040--Hb_002413_010 Hb_002893_040--Hb_001951_200 Hb_001776_210 Hb_001776_210 Hb_002893_040--Hb_001776_210 Hb_002092_120 Hb_002092_120 Hb_002893_040--Hb_002092_120 Hb_002572_020 Hb_002572_020 Hb_002893_040--Hb_002572_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.631402 0.967392 0.992256 0.641686 0.412351 0.251073
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.07966 0.732171 0.437394 0.433528 0.547602

CAGE analysis