Hb_011472_010

Information

Type -
Description -
Location Contig11472: 1464-3763
Sequence    

Annotation

kegg
ID cit:102627168
description protein yippee-like
nr
ID XP_012087880.1
description PREDICTED: protein yippee-like [Jatropha curcas]
swissprot
ID P59234
description Protein yippee-like OS=Solanum tuberosum PE=2 SV=1
trembl
ID A0A067JNS1
description Protein yippee-like OS=Jatropha curcas GN=JCGZ_25027 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011472_010 0.0 - - PREDICTED: protein yippee-like [Jatropha curcas]
2 Hb_012163_020 0.1900081239 - - PREDICTED: uncharacterized protein LOC105650815 isoform X3 [Jatropha curcas]
3 Hb_000732_210 0.2058851373 - - hexose transporter 1 [Hevea brasiliensis]
4 Hb_007943_190 0.2077774131 - - cytoplasmic dynein light chain, putative [Ricinus communis]
5 Hb_001377_420 0.2096926258 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000922_120 0.216781212 - - PREDICTED: carbonic anhydrase 2-like [Jatropha curcas]
7 Hb_001504_140 0.2182589142 - - PREDICTED: deSI-like protein At4g17486 [Populus euphratica]
8 Hb_000382_020 0.2296415844 - - PREDICTED: uncharacterized protein LOC105633610 [Jatropha curcas]
9 Hb_005496_090 0.2322600581 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
10 Hb_001242_050 0.2350429353 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002659_030 0.2371275651 - - copper transport protein atox1, putative [Ricinus communis]
12 Hb_144484_010 0.2413222145 - - calcineurin-like phosphoesterase [Manihot esculenta]
13 Hb_083380_010 0.246187325 - - -
14 Hb_000260_280 0.2505791927 - - auxin:hydrogen symporter, putative [Ricinus communis]
15 Hb_029920_020 0.2507611643 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Jatropha curcas]
16 Hb_158092_010 0.2511236621 - - CYP51 [Hevea brasiliensis]
17 Hb_003777_170 0.2511749723 - - conserved hypothetical protein [Ricinus communis]
18 Hb_117807_010 0.2514156166 - - PREDICTED: uncharacterized protein LOC105635720 [Jatropha curcas]
19 Hb_000059_010 0.2515716642 - - amino acid binding protein, putative [Ricinus communis]
20 Hb_000042_220 0.2525599381 - - PREDICTED: uncharacterized protein LOC105632809 [Jatropha curcas]

Gene co-expression network

sample Hb_011472_010 Hb_011472_010 Hb_012163_020 Hb_012163_020 Hb_011472_010--Hb_012163_020 Hb_000732_210 Hb_000732_210 Hb_011472_010--Hb_000732_210 Hb_007943_190 Hb_007943_190 Hb_011472_010--Hb_007943_190 Hb_001377_420 Hb_001377_420 Hb_011472_010--Hb_001377_420 Hb_000922_120 Hb_000922_120 Hb_011472_010--Hb_000922_120 Hb_001504_140 Hb_001504_140 Hb_011472_010--Hb_001504_140 Hb_117807_010 Hb_117807_010 Hb_012163_020--Hb_117807_010 Hb_003097_060 Hb_003097_060 Hb_012163_020--Hb_003097_060 Hb_000170_120 Hb_000170_120 Hb_012163_020--Hb_000170_120 Hb_012163_020--Hb_001377_420 Hb_012163_020--Hb_007943_190 Hb_000340_310 Hb_000340_310 Hb_012163_020--Hb_000340_310 Hb_162275_020 Hb_162275_020 Hb_000732_210--Hb_162275_020 Hb_130719_010 Hb_130719_010 Hb_000732_210--Hb_130719_010 Hb_000117_100 Hb_000117_100 Hb_000732_210--Hb_000117_100 Hb_000614_170 Hb_000614_170 Hb_000732_210--Hb_000614_170 Hb_000297_020 Hb_000297_020 Hb_000732_210--Hb_000297_020 Hb_002217_230 Hb_002217_230 Hb_000732_210--Hb_002217_230 Hb_027751_060 Hb_027751_060 Hb_007943_190--Hb_027751_060 Hb_005496_090 Hb_005496_090 Hb_007943_190--Hb_005496_090 Hb_083380_010 Hb_083380_010 Hb_007943_190--Hb_083380_010 Hb_023344_050 Hb_023344_050 Hb_007943_190--Hb_023344_050 Hb_025645_030 Hb_025645_030 Hb_007943_190--Hb_025645_030 Hb_158092_010 Hb_158092_010 Hb_001377_420--Hb_158092_010 Hb_001242_050 Hb_001242_050 Hb_001377_420--Hb_001242_050 Hb_001377_420--Hb_005496_090 Hb_000928_110 Hb_000928_110 Hb_001377_420--Hb_000928_110 Hb_005356_040 Hb_005356_040 Hb_001377_420--Hb_005356_040 Hb_003462_120 Hb_003462_120 Hb_001377_420--Hb_003462_120 Hb_012022_130 Hb_012022_130 Hb_000922_120--Hb_012022_130 Hb_023301_010 Hb_023301_010 Hb_000922_120--Hb_023301_010 Hb_001454_100 Hb_001454_100 Hb_000922_120--Hb_001454_100 Hb_144484_010 Hb_144484_010 Hb_000922_120--Hb_144484_010 Hb_001712_040 Hb_001712_040 Hb_000922_120--Hb_001712_040 Hb_001504_140--Hb_144484_010 Hb_005671_020 Hb_005671_020 Hb_001504_140--Hb_005671_020 Hb_001635_020 Hb_001635_020 Hb_001504_140--Hb_001635_020 Hb_002473_110 Hb_002473_110 Hb_001504_140--Hb_002473_110 Hb_001504_140--Hb_158092_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.219154 0.3768 0.976163 12.2916 0.142013 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.16339 7.30074 14.1609 4.38072 1.69987

CAGE analysis