Hb_011505_010

Information

Type -
Description -
Location Contig11505: 4625-6607
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011505_010 0.0 - - -
2 Hb_006925_090 0.1806414022 - - PREDICTED: protein HAPLESS 2 [Populus euphratica]
3 Hb_000260_150 0.2588861663 - - hypothetical protein POPTR_0344s002001g, partial [Populus trichocarpa]
4 Hb_001195_430 0.2757353218 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000392_460 0.2828835145 - - Pectate lyase precursor, putative [Ricinus communis]
6 Hb_104498_030 0.2849594419 - - hypothetical protein JCGZ_11092 [Jatropha curcas]
7 Hb_011174_030 0.289984596 - - -
8 Hb_021346_040 0.2969803183 - - hypothetical protein JCGZ_26751 [Jatropha curcas]
9 Hb_083822_010 0.3032112938 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
10 Hb_026527_040 0.3270006842 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000853_040 0.3436869068 - - conserved hypothetical protein [Ricinus communis]
12 Hb_171062_010 0.3475516952 - - hypothetical protein VITISV_036059 [Vitis vinifera]
13 Hb_001623_310 0.3563948871 - - hypothetical protein CISIN_1g042596mg [Citrus sinensis]
14 Hb_025669_030 0.3596435634 - - PREDICTED: uncharacterized protein LOC105649301 [Jatropha curcas]
15 Hb_003938_030 0.3637349841 transcription factor TF Family: ERF ethylene-responsive transcription factor 2 [Hevea brasiliensis]
16 Hb_005679_080 0.3668332739 - - PREDICTED: PH-interacting protein-like [Populus euphratica]
17 Hb_010815_050 0.3918835203 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
18 Hb_167452_010 0.3963118139 - - hypothetical protein JCGZ_03682 [Jatropha curcas]
19 Hb_001277_210 0.3979876029 - - -
20 Hb_000375_230 0.4026463191 - - Chain A, Anomalous Substructure Of Hydroxynitrile Lyase

Gene co-expression network

sample Hb_011505_010 Hb_011505_010 Hb_006925_090 Hb_006925_090 Hb_011505_010--Hb_006925_090 Hb_000260_150 Hb_000260_150 Hb_011505_010--Hb_000260_150 Hb_001195_430 Hb_001195_430 Hb_011505_010--Hb_001195_430 Hb_000392_460 Hb_000392_460 Hb_011505_010--Hb_000392_460 Hb_104498_030 Hb_104498_030 Hb_011505_010--Hb_104498_030 Hb_011174_030 Hb_011174_030 Hb_011505_010--Hb_011174_030 Hb_006925_090--Hb_000260_150 Hb_026527_040 Hb_026527_040 Hb_006925_090--Hb_026527_040 Hb_006925_090--Hb_104498_030 Hb_171062_010 Hb_171062_010 Hb_006925_090--Hb_171062_010 Hb_002284_110 Hb_002284_110 Hb_006925_090--Hb_002284_110 Hb_001638_010 Hb_001638_010 Hb_000260_150--Hb_001638_010 Hb_002257_020 Hb_002257_020 Hb_000260_150--Hb_002257_020 Hb_167452_010 Hb_167452_010 Hb_000260_150--Hb_167452_010 Hb_114435_010 Hb_114435_010 Hb_000260_150--Hb_114435_010 Hb_001195_430--Hb_011174_030 Hb_010815_050 Hb_010815_050 Hb_001195_430--Hb_010815_050 Hb_002435_020 Hb_002435_020 Hb_001195_430--Hb_002435_020 Hb_000069_580 Hb_000069_580 Hb_001195_430--Hb_000069_580 Hb_002259_180 Hb_002259_180 Hb_001195_430--Hb_002259_180 Hb_021346_040 Hb_021346_040 Hb_000392_460--Hb_021346_040 Hb_083822_010 Hb_083822_010 Hb_000392_460--Hb_083822_010 Hb_000853_040 Hb_000853_040 Hb_000392_460--Hb_000853_040 Hb_001623_310 Hb_001623_310 Hb_000392_460--Hb_001623_310 Hb_025669_030 Hb_025669_030 Hb_000392_460--Hb_025669_030 Hb_003938_030 Hb_003938_030 Hb_000392_460--Hb_003938_030 Hb_000175_550 Hb_000175_550 Hb_104498_030--Hb_000175_550 Hb_176121_010 Hb_176121_010 Hb_104498_030--Hb_176121_010 Hb_000701_070 Hb_000701_070 Hb_104498_030--Hb_000701_070 Hb_003658_030 Hb_003658_030 Hb_104498_030--Hb_003658_030 Hb_011174_030--Hb_002259_180 Hb_011174_030--Hb_002435_020 Hb_006355_120 Hb_006355_120 Hb_011174_030--Hb_006355_120 Hb_001410_050 Hb_001410_050 Hb_011174_030--Hb_001410_050 Hb_011174_030--Hb_000069_580
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.043649 0.12009 0 0 0.0457625
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0937425 0 0 0

CAGE analysis