Hb_011512_090

Information

Type -
Description -
Location Contig11512: 49074-50396
Sequence    

Annotation

kegg
ID rcu:RCOM_1023290
description Hydroxyethylthiazole kinase, putative (EC:2.7.1.50)
nr
ID XP_002518167.1
description Hydroxyethylthiazole kinase, putative [Ricinus communis]
swissprot
ID Q9LIQ4
description Hydroxyethylthiazole kinase OS=Arabidopsis thaliana GN=THIM PE=1 SV=1
trembl
ID B9RWP8
description Hydroxyethylthiazole kinase, putative OS=Ricinus communis GN=RCOM_1023290 PE=3 SV=1
Gene Ontology
ID GO:0004417
description hydroxyethylthiazole kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04569: 49826-51992 , PASA_asmbl_04570: 50710-51992
cDNA
(Sanger)
(ID:Location)		 013_I02.ab1: 50973-51992

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011512_090 0.0 - - Hydroxyethylthiazole kinase, putative [Ricinus communis]
2 Hb_000976_040 0.0863360033 - - molybdopterin cofactor sulfurase, putative [Ricinus communis]
3 Hb_002110_030 0.0955808593 - - PREDICTED: WD and tetratricopeptide repeats protein 1 isoform X3 [Jatropha curcas]
4 Hb_002400_400 0.0996834184 - - PREDICTED: topless-related protein 1-like isoform X3 [Jatropha curcas]
5 Hb_000200_280 0.1014353546 - - PREDICTED: uncharacterized protein LOC105636924 [Jatropha curcas]
6 Hb_002005_090 0.1032614874 - - conserved hypothetical protein [Ricinus communis]
7 Hb_001621_130 0.1054830755 - - PREDICTED: pumilio homolog 1-like isoform X1 [Jatropha curcas]
8 Hb_005048_100 0.106706127 - - secretory carrier membrane protein, putative [Ricinus communis]
9 Hb_005214_090 0.1087249232 - - PREDICTED: uncharacterized protein LOC105636015 [Jatropha curcas]
10 Hb_000244_220 0.109521917 - - PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Jatropha curcas]
11 Hb_002972_020 0.1113328648 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
12 Hb_000856_310 0.1133079005 - - PREDICTED: hypersensitive-induced response protein 1 [Jatropha curcas]
13 Hb_010531_030 0.1165957999 - - PREDICTED: uncharacterized protein LOC105629654 [Jatropha curcas]
14 Hb_000853_120 0.1166104682 - - PREDICTED: ethylene response sensor 1 [Jatropha curcas]
15 Hb_001575_010 0.1176275864 - - PREDICTED: pumilio homolog 6, chloroplastic isoform X1 [Jatropha curcas]
16 Hb_000140_480 0.1184362453 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
17 Hb_003058_060 0.1189067239 - - PREDICTED: proteasome-associated protein ECM29 homolog [Jatropha curcas]
18 Hb_111198_020 0.1195235373 - - hypothetical protein JCGZ_06907 [Jatropha curcas]
19 Hb_000369_130 0.119992755 - - PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Jatropha curcas]
20 Hb_104061_020 0.1210648475 - - PREDICTED: UV-stimulated scaffold protein A homolog [Jatropha curcas]

Gene co-expression network

sample Hb_011512_090 Hb_011512_090 Hb_000976_040 Hb_000976_040 Hb_011512_090--Hb_000976_040 Hb_002110_030 Hb_002110_030 Hb_011512_090--Hb_002110_030 Hb_002400_400 Hb_002400_400 Hb_011512_090--Hb_002400_400 Hb_000200_280 Hb_000200_280 Hb_011512_090--Hb_000200_280 Hb_002005_090 Hb_002005_090 Hb_011512_090--Hb_002005_090 Hb_001621_130 Hb_001621_130 Hb_011512_090--Hb_001621_130 Hb_000853_120 Hb_000853_120 Hb_000976_040--Hb_000853_120 Hb_000976_040--Hb_000200_280 Hb_156850_070 Hb_156850_070 Hb_000976_040--Hb_156850_070 Hb_000640_130 Hb_000640_130 Hb_000976_040--Hb_000640_130 Hb_005143_030 Hb_005143_030 Hb_000976_040--Hb_005143_030 Hb_006831_040 Hb_006831_040 Hb_002110_030--Hb_006831_040 Hb_001019_180 Hb_001019_180 Hb_002110_030--Hb_001019_180 Hb_073562_010 Hb_073562_010 Hb_002110_030--Hb_073562_010 Hb_000330_040 Hb_000330_040 Hb_002110_030--Hb_000330_040 Hb_001575_010 Hb_001575_010 Hb_002110_030--Hb_001575_010 Hb_002007_240 Hb_002007_240 Hb_002400_400--Hb_002007_240 Hb_000244_220 Hb_000244_220 Hb_002400_400--Hb_000244_220 Hb_005214_090 Hb_005214_090 Hb_002400_400--Hb_005214_090 Hb_002400_400--Hb_000200_280 Hb_002400_400--Hb_000976_040 Hb_002827_020 Hb_002827_020 Hb_000200_280--Hb_002827_020 Hb_089140_030 Hb_089140_030 Hb_000200_280--Hb_089140_030 Hb_011716_090 Hb_011716_090 Hb_000200_280--Hb_011716_090 Hb_000200_280--Hb_002110_030 Hb_005048_100 Hb_005048_100 Hb_002005_090--Hb_005048_100 Hb_003849_240 Hb_003849_240 Hb_002005_090--Hb_003849_240 Hb_000823_030 Hb_000823_030 Hb_002005_090--Hb_000823_030 Hb_000069_410 Hb_000069_410 Hb_002005_090--Hb_000069_410 Hb_003058_060 Hb_003058_060 Hb_002005_090--Hb_003058_060 Hb_002005_090--Hb_001575_010 Hb_010053_030 Hb_010053_030 Hb_001621_130--Hb_010053_030 Hb_000369_130 Hb_000369_130 Hb_001621_130--Hb_000369_130 Hb_006478_060 Hb_006478_060 Hb_001621_130--Hb_006478_060 Hb_000343_030 Hb_000343_030 Hb_001621_130--Hb_000343_030 Hb_000923_080 Hb_000923_080 Hb_001621_130--Hb_000923_080 Hb_000505_020 Hb_000505_020 Hb_001621_130--Hb_000505_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.9514 17.5513 5.53448 5.28638 17.9149 14.5881
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.48784 9.05523 7.70001 26.9099 5.13898

CAGE analysis