Hb_011515_030

Information

Type -
Description -
Location Contig11515: 10479-15231
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011515_030 0.0 - - -
2 Hb_141838_010 0.1299247718 - - -
3 Hb_002983_100 0.1928387481 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
4 Hb_000317_080 0.1975486436 - - PREDICTED: probable galacturonosyltransferase 10 [Jatropha curcas]
5 Hb_002903_120 0.1988907632 - - -
6 Hb_004092_010 0.2008151448 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
7 Hb_003320_030 0.2015344326 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000331_610 0.2041737459 - - hypothetical protein B456_003G108600 [Gossypium raimondii]
9 Hb_010368_070 0.2137855443 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000976_180 0.2160726983 - - PREDICTED: uncharacterized protein LOC102592049 [Solanum tuberosum]
11 Hb_031073_010 0.2182404327 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-2-like [Jatropha curcas]
12 Hb_168978_040 0.2185152112 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
13 Hb_000525_040 0.2219342561 - - -
14 Hb_005057_010 0.2243713174 - - -
15 Hb_000987_050 0.2324663965 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
16 Hb_130177_010 0.2355168453 - - hypothetical protein RCOM_0897890 [Ricinus communis]
17 Hb_001329_260 0.2361241536 - - PREDICTED: uncharacterized protein LOC105642694 isoform X1 [Jatropha curcas]
18 Hb_001268_230 0.2376423709 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
19 Hb_008147_030 0.2379798481 - - PREDICTED: uncharacterized protein LOC105646808 [Jatropha curcas]
20 Hb_004650_080 0.2395167519 - - -

Gene co-expression network

sample Hb_011515_030 Hb_011515_030 Hb_141838_010 Hb_141838_010 Hb_011515_030--Hb_141838_010 Hb_002983_100 Hb_002983_100 Hb_011515_030--Hb_002983_100 Hb_000317_080 Hb_000317_080 Hb_011515_030--Hb_000317_080 Hb_002903_120 Hb_002903_120 Hb_011515_030--Hb_002903_120 Hb_004092_010 Hb_004092_010 Hb_011515_030--Hb_004092_010 Hb_003320_030 Hb_003320_030 Hb_011515_030--Hb_003320_030 Hb_008147_030 Hb_008147_030 Hb_141838_010--Hb_008147_030 Hb_141838_010--Hb_002983_100 Hb_141838_010--Hb_003320_030 Hb_141838_010--Hb_004092_010 Hb_141838_010--Hb_002903_120 Hb_005116_020 Hb_005116_020 Hb_002983_100--Hb_005116_020 Hb_002983_100--Hb_003320_030 Hb_059126_010 Hb_059126_010 Hb_002983_100--Hb_059126_010 Hb_033225_020 Hb_033225_020 Hb_002983_100--Hb_033225_020 Hb_001125_030 Hb_001125_030 Hb_002983_100--Hb_001125_030 Hb_001268_230 Hb_001268_230 Hb_000317_080--Hb_001268_230 Hb_098315_110 Hb_098315_110 Hb_000317_080--Hb_098315_110 Hb_053543_010 Hb_053543_010 Hb_000317_080--Hb_053543_010 Hb_000987_050 Hb_000987_050 Hb_000317_080--Hb_000987_050 Hb_004648_040 Hb_004648_040 Hb_000317_080--Hb_004648_040 Hb_001628_110 Hb_001628_110 Hb_000317_080--Hb_001628_110 Hb_010368_070 Hb_010368_070 Hb_002903_120--Hb_010368_070 Hb_000173_210 Hb_000173_210 Hb_002903_120--Hb_000173_210 Hb_002897_040 Hb_002897_040 Hb_002903_120--Hb_002897_040 Hb_000525_040 Hb_000525_040 Hb_002903_120--Hb_000525_040 Hb_045502_010 Hb_045502_010 Hb_002903_120--Hb_045502_010 Hb_000544_120 Hb_000544_120 Hb_002903_120--Hb_000544_120 Hb_004092_010--Hb_000525_040 Hb_004092_010--Hb_010368_070 Hb_011616_030 Hb_011616_030 Hb_004092_010--Hb_011616_030 Hb_005057_010 Hb_005057_010 Hb_004092_010--Hb_005057_010 Hb_095397_010 Hb_095397_010 Hb_004092_010--Hb_095397_010 Hb_001146_070 Hb_001146_070 Hb_004092_010--Hb_001146_070 Hb_001329_260 Hb_001329_260 Hb_003320_030--Hb_001329_260 Hb_003320_030--Hb_005116_020 Hb_001159_210 Hb_001159_210 Hb_003320_030--Hb_001159_210 Hb_000038_150 Hb_000038_150 Hb_003320_030--Hb_000038_150 Hb_134732_010 Hb_134732_010 Hb_003320_030--Hb_134732_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.98914 0.18688 0.0716042 0.0213129 12.672 2.07786
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.73428 1.22758 0.724057 0.413037 0.554326

CAGE analysis