Hb_011537_020

Information

Type -
Description -
Location Contig11537: 20172-21422
Sequence    

Annotation

kegg
ID rcu:RCOM_1576550
description hypothetical protein
nr
ID XP_012087430.1
description PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JMJ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22667 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04645: 20654-20889
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011537_020 0.0 - - PREDICTED: uncharacterized serine-rich protein C215.13-like [Jatropha curcas]
2 Hb_001018_080 0.0595084283 - - conserved hypothetical protein [Ricinus communis]
3 Hb_008899_030 0.1011464653 - - Lipase class 3-related protein, putative [Theobroma cacao]
4 Hb_000739_160 0.1146783468 - - DNA binding protein, putative [Ricinus communis]
5 Hb_002307_010 0.1149021672 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
6 Hb_004627_020 0.1165984006 - - Protein MLO, putative [Ricinus communis]
7 Hb_015306_010 0.1170074876 - - PREDICTED: uncharacterized protein LOC105636357 [Jatropha curcas]
8 Hb_000203_080 0.1181907909 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
9 Hb_002811_020 0.1194046974 - - Cysteine synthase [Morus notabilis]
10 Hb_006788_100 0.1230852709 - - PREDICTED: uncharacterized protein LOC105649919 isoform X1 [Jatropha curcas]
11 Hb_000096_210 0.1239836201 - - PREDICTED: probable carboxylesterase 7 [Jatropha curcas]
12 Hb_003142_060 0.1281966889 - - PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Jatropha curcas]
13 Hb_009193_060 0.1284230629 - - PREDICTED: ureide permease 1-like [Jatropha curcas]
14 Hb_000417_280 0.1287085041 - - conserved hypothetical protein [Ricinus communis]
15 Hb_032717_010 0.1299840358 - - unnamed protein product [Vitis vinifera]
16 Hb_006634_090 0.1301666127 - - PREDICTED: uncharacterized protein LOC105646581 [Jatropha curcas]
17 Hb_005276_220 0.1310055721 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
18 Hb_001008_110 0.1313403163 - - -
19 Hb_003842_010 0.1315869052 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_003106_110 0.132787011 - - betaine aldehyde dehydrogenase 1, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_011537_020 Hb_011537_020 Hb_001018_080 Hb_001018_080 Hb_011537_020--Hb_001018_080 Hb_008899_030 Hb_008899_030 Hb_011537_020--Hb_008899_030 Hb_000739_160 Hb_000739_160 Hb_011537_020--Hb_000739_160 Hb_002307_010 Hb_002307_010 Hb_011537_020--Hb_002307_010 Hb_004627_020 Hb_004627_020 Hb_011537_020--Hb_004627_020 Hb_015306_010 Hb_015306_010 Hb_011537_020--Hb_015306_010 Hb_001018_080--Hb_002307_010 Hb_001018_080--Hb_008899_030 Hb_003842_010 Hb_003842_010 Hb_001018_080--Hb_003842_010 Hb_002811_020 Hb_002811_020 Hb_001018_080--Hb_002811_020 Hb_001018_080--Hb_000739_160 Hb_008899_030--Hb_004627_020 Hb_039022_020 Hb_039022_020 Hb_008899_030--Hb_039022_020 Hb_000261_420 Hb_000261_420 Hb_008899_030--Hb_000261_420 Hb_011472_020 Hb_011472_020 Hb_008899_030--Hb_011472_020 Hb_003106_110 Hb_003106_110 Hb_000739_160--Hb_003106_110 Hb_000096_210 Hb_000096_210 Hb_000739_160--Hb_000096_210 Hb_006634_090 Hb_006634_090 Hb_000739_160--Hb_006634_090 Hb_006934_020 Hb_006934_020 Hb_000739_160--Hb_006934_020 Hb_002301_370 Hb_002301_370 Hb_000739_160--Hb_002301_370 Hb_000417_280 Hb_000417_280 Hb_000739_160--Hb_000417_280 Hb_001114_120 Hb_001114_120 Hb_002307_010--Hb_001114_120 Hb_000112_050 Hb_000112_050 Hb_002307_010--Hb_000112_050 Hb_000834_040 Hb_000834_040 Hb_002307_010--Hb_000834_040 Hb_003847_170 Hb_003847_170 Hb_002307_010--Hb_003847_170 Hb_001565_010 Hb_001565_010 Hb_004627_020--Hb_001565_010 Hb_009554_030 Hb_009554_030 Hb_004627_020--Hb_009554_030 Hb_000203_080 Hb_000203_080 Hb_004627_020--Hb_000203_080 Hb_170878_070 Hb_170878_070 Hb_004627_020--Hb_170878_070 Hb_000866_190 Hb_000866_190 Hb_015306_010--Hb_000866_190 Hb_015306_010--Hb_003106_110 Hb_015306_010--Hb_009554_030 Hb_000398_140 Hb_000398_140 Hb_015306_010--Hb_000398_140 Hb_004122_060 Hb_004122_060 Hb_015306_010--Hb_004122_060 Hb_000258_210 Hb_000258_210 Hb_015306_010--Hb_000258_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.122276 2.61899 2.73966 2.73191 0.031688 0.0297122
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0772144 0.24296 0 4.93563 2.45679

CAGE analysis