Hb_011639_080

Information

Type -
Description -
Location Contig11639: 74936-80835
Sequence    

Annotation

kegg
ID rcu:RCOM_0818120
description kinase, putative (EC:2.7.10.2)
nr
ID XP_011009734.1
description PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
swissprot
ID Q9SCZ4
description Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1
trembl
ID B9RX61
description Kinase, putative OS=Ricinus communis GN=RCOM_0818120 PE=3 SV=1
Gene Ontology
ID GO:0004672
description receptor-like protein kinase feronia

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011639_080 0.0 - - PREDICTED: LOW QUALITY PROTEIN: receptor-like protein kinase FERONIA [Populus euphratica]
2 Hb_000454_190 0.1920338585 - - PREDICTED: probable ribosome-binding factor A, chloroplastic [Jatropha curcas]
3 Hb_000243_090 0.1944561064 - - PREDICTED: protein RTE1-HOMOLOG isoform X1 [Jatropha curcas]
4 Hb_019516_030 0.2020668751 - - Calcyclin-binding protein, putative [Ricinus communis]
5 Hb_006570_010 0.2185329454 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002150_110 0.2197066179 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
7 Hb_000175_630 0.2204399278 - - PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Jatropha curcas]
8 Hb_006052_030 0.2205011836 - - PREDICTED: dnaJ protein ERDJ3A [Jatropha curcas]
9 Hb_000334_170 0.2238602875 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 isoform X1 [Jatropha curcas]
10 Hb_000946_170 0.2241258742 - - PREDICTED: 2-aminoethanethiol dioxygenase-like [Jatropha curcas]
11 Hb_048141_030 0.2246575782 - - PREDICTED: pentatricopeptide repeat-containing protein At3g59040-like [Prunus mume]
12 Hb_003026_030 0.2312280622 - - transformer serine/arginine-rich ribonucleoprotein [Populus trichocarpa]
13 Hb_005276_130 0.2317047202 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000136_030 0.2325335842 - - serine/arginine rich splicing factor, putative [Ricinus communis]
15 Hb_004738_110 0.2335817929 - - phosphoenolpyruvate carboxylase [Manihot esculenta]
16 Hb_001105_050 0.2358888709 - - PREDICTED: uncharacterized protein LOC105642744 isoform X1 [Jatropha curcas]
17 Hb_000205_150 0.2395576338 - - PREDICTED: uncharacterized protein LOC105647752 [Jatropha curcas]
18 Hb_000207_190 0.2414713183 - - PREDICTED: uncharacterized protein LOC105632052 [Jatropha curcas]
19 Hb_002016_010 0.2430626397 - - PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Jatropha curcas]
20 Hb_000958_070 0.2454787034 - - hypothetical protein PRUPE_ppa007681mg [Prunus persica]

Gene co-expression network

sample Hb_011639_080 Hb_011639_080 Hb_000454_190 Hb_000454_190 Hb_011639_080--Hb_000454_190 Hb_000243_090 Hb_000243_090 Hb_011639_080--Hb_000243_090 Hb_019516_030 Hb_019516_030 Hb_011639_080--Hb_019516_030 Hb_006570_010 Hb_006570_010 Hb_011639_080--Hb_006570_010 Hb_002150_110 Hb_002150_110 Hb_011639_080--Hb_002150_110 Hb_000175_630 Hb_000175_630 Hb_011639_080--Hb_000175_630 Hb_005527_030 Hb_005527_030 Hb_000454_190--Hb_005527_030 Hb_000958_070 Hb_000958_070 Hb_000454_190--Hb_000958_070 Hb_011344_020 Hb_011344_020 Hb_000454_190--Hb_011344_020 Hb_000343_110 Hb_000343_110 Hb_000454_190--Hb_000343_110 Hb_000982_050 Hb_000982_050 Hb_000454_190--Hb_000982_050 Hb_006445_010 Hb_006445_010 Hb_000454_190--Hb_006445_010 Hb_007416_370 Hb_007416_370 Hb_000243_090--Hb_007416_370 Hb_098315_070 Hb_098315_070 Hb_000243_090--Hb_098315_070 Hb_149838_010 Hb_149838_010 Hb_000243_090--Hb_149838_010 Hb_007456_010 Hb_007456_010 Hb_000243_090--Hb_007456_010 Hb_000265_220 Hb_000265_220 Hb_000243_090--Hb_000265_220 Hb_001369_370 Hb_001369_370 Hb_019516_030--Hb_001369_370 Hb_019516_030--Hb_000454_190 Hb_000062_110 Hb_000062_110 Hb_019516_030--Hb_000062_110 Hb_000941_140 Hb_000941_140 Hb_019516_030--Hb_000941_140 Hb_011004_020 Hb_011004_020 Hb_019516_030--Hb_011004_020 Hb_004635_080 Hb_004635_080 Hb_019516_030--Hb_004635_080 Hb_000085_140 Hb_000085_140 Hb_006570_010--Hb_000085_140 Hb_065525_130 Hb_065525_130 Hb_006570_010--Hb_065525_130 Hb_001205_300 Hb_001205_300 Hb_006570_010--Hb_001205_300 Hb_012098_150 Hb_012098_150 Hb_006570_010--Hb_012098_150 Hb_003462_070 Hb_003462_070 Hb_006570_010--Hb_003462_070 Hb_001348_190 Hb_001348_190 Hb_006570_010--Hb_001348_190 Hb_000347_270 Hb_000347_270 Hb_002150_110--Hb_000347_270 Hb_003638_010 Hb_003638_010 Hb_002150_110--Hb_003638_010 Hb_007479_070 Hb_007479_070 Hb_002150_110--Hb_007479_070 Hb_001105_050 Hb_001105_050 Hb_002150_110--Hb_001105_050 Hb_002150_110--Hb_000085_140 Hb_048141_030 Hb_048141_030 Hb_002150_110--Hb_048141_030 Hb_001427_210 Hb_001427_210 Hb_000175_630--Hb_001427_210 Hb_000041_300 Hb_000041_300 Hb_000175_630--Hb_000041_300 Hb_000264_180 Hb_000264_180 Hb_000175_630--Hb_000264_180 Hb_000334_170 Hb_000334_170 Hb_000175_630--Hb_000334_170 Hb_003470_070 Hb_003470_070 Hb_000175_630--Hb_003470_070 Hb_012262_040 Hb_012262_040 Hb_000175_630--Hb_012262_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0877646 0.22277 0.61179 0.247839 1.18244 0.512689
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.214008 0.145954 0.0214825 0.0623368 0.718838

CAGE analysis