Hb_011639_150

Information

Type -
Description -
Location Contig11639: 198922-200752
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011639_150 0.0 - - -
2 Hb_000078_170 0.1447814579 - - -
3 Hb_005962_010 0.1564857639 - - -
4 Hb_008556_020 0.1720862198 - - -
5 Hb_001709_130 0.17484711 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
6 Hb_119886_040 0.1858784879 - - -
7 Hb_002311_230 0.1953417585 - - -
8 Hb_000483_180 0.2048192006 - - -
9 Hb_007044_010 0.2054535159 - - -
10 Hb_005527_030 0.2180856963 - - PREDICTED: pentatricopeptide repeat-containing protein At3g42630 isoform X1 [Jatropha curcas]
11 Hb_011639_010 0.2207327933 - - -
12 Hb_001235_100 0.2351391252 - - heat-shock protein, putative [Ricinus communis]
13 Hb_004884_020 0.2371045795 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X2 [Jatropha curcas]
14 Hb_006816_120 0.2389886464 - - Nicotianamine synthase, putative [Ricinus communis]
15 Hb_002814_120 0.2391602733 - - PREDICTED: uncharacterized protein LOC105633463 [Jatropha curcas]
16 Hb_000330_080 0.2428812657 - - auxilin, putative [Ricinus communis]
17 Hb_002188_090 0.2449181322 - - PREDICTED: pre-mRNA-processing protein 40A isoform X1 [Jatropha curcas]
18 Hb_001009_100 0.2473478278 - - -
19 Hb_030627_040 0.247460141 - - PREDICTED: probable receptor-like protein kinase At5g59700 [Jatropha curcas]
20 Hb_007416_370 0.2488737802 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_011639_150 Hb_011639_150 Hb_000078_170 Hb_000078_170 Hb_011639_150--Hb_000078_170 Hb_005962_010 Hb_005962_010 Hb_011639_150--Hb_005962_010 Hb_008556_020 Hb_008556_020 Hb_011639_150--Hb_008556_020 Hb_001709_130 Hb_001709_130 Hb_011639_150--Hb_001709_130 Hb_119886_040 Hb_119886_040 Hb_011639_150--Hb_119886_040 Hb_002311_230 Hb_002311_230 Hb_011639_150--Hb_002311_230 Hb_000078_170--Hb_005962_010 Hb_000330_080 Hb_000330_080 Hb_000078_170--Hb_000330_080 Hb_000078_170--Hb_008556_020 Hb_000078_170--Hb_001709_130 Hb_000078_170--Hb_002311_230 Hb_005962_010--Hb_008556_020 Hb_005962_010--Hb_002311_230 Hb_001766_040 Hb_001766_040 Hb_005962_010--Hb_001766_040 Hb_005962_010--Hb_119886_040 Hb_008556_020--Hb_119886_040 Hb_008556_020--Hb_002311_230 Hb_007044_010 Hb_007044_010 Hb_008556_020--Hb_007044_010 Hb_001709_130--Hb_000330_080 Hb_004884_020 Hb_004884_020 Hb_001709_130--Hb_004884_020 Hb_001009_100 Hb_001009_100 Hb_001709_130--Hb_001009_100 Hb_004361_020 Hb_004361_020 Hb_001709_130--Hb_004361_020 Hb_000483_180 Hb_000483_180 Hb_119886_040--Hb_000483_180 Hb_119886_040--Hb_002311_230 Hb_007223_010 Hb_007223_010 Hb_119886_040--Hb_007223_010 Hb_011639_010 Hb_011639_010 Hb_119886_040--Hb_011639_010 Hb_002311_230--Hb_000483_180 Hb_002311_230--Hb_007044_010 Hb_002311_230--Hb_011639_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.260985 0.214198 0.0642765 0.0255687 0.904079 0.406539
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0372636 0.0879409 0 0.129006 0.426286

CAGE analysis