Hb_011671_180

Information

Type -
Description -
Location Contig11671: 142054-146231
Sequence    

Annotation

kegg
ID egr:104449863
description probable quinone oxidoreductase
nr
ID XP_012090472.1
description PREDICTED: probable quinone oxidoreductase [Jatropha curcas]
swissprot
ID P43903
description Quinone oxidoreductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=qor PE=3 SV=2
trembl
ID A0A067JSC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26280 PE=4 SV=1
Gene Ontology
ID GO:0005829
description probable quinone oxidoreductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05145: 142008-146086
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011671_180 0.0 - - PREDICTED: probable quinone oxidoreductase [Jatropha curcas]
2 Hb_000497_110 0.06430601 - - PREDICTED: uncharacterized protein LOC105647268 [Jatropha curcas]
3 Hb_002000_080 0.0677234757 - - PREDICTED: polypyrimidine tract-binding protein homolog 3 isoform X2 [Jatropha curcas]
4 Hb_001009_170 0.0695640668 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
5 Hb_004920_120 0.0852062903 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000252_200 0.0865349248 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000031_120 0.0866331674 - - PREDICTED: uncharacterized protein LOC105637488 [Jatropha curcas]
8 Hb_073973_100 0.0887310926 - - PREDICTED: uncharacterized protein LOC105638910 [Jatropha curcas]
9 Hb_031340_050 0.0890526772 - - PREDICTED: tropinone reductase 1-like isoform X1 [Jatropha curcas]
10 Hb_001579_220 0.0894882765 - - PREDICTED: pantothenate kinase 1 [Jatropha curcas]
11 Hb_006913_010 0.0908747208 - - PREDICTED: uncharacterized protein LOC105649144 [Jatropha curcas]
12 Hb_004837_130 0.0942097564 - - PREDICTED: armadillo repeat-containing protein 8 [Jatropha curcas]
13 Hb_000015_040 0.0957144423 - - PREDICTED: uncharacterized protein LOC105647937 isoform X2 [Jatropha curcas]
14 Hb_002481_080 0.0958061918 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]
15 Hb_001545_080 0.0960951899 - - PREDICTED: tRNA pseudouridine(38/39) synthase isoform X3 [Jatropha curcas]
16 Hb_000999_050 0.0980461752 - - PREDICTED: eukaryotic translation initiation factor isoform 4G-1 isoform X1 [Jatropha curcas]
17 Hb_027472_150 0.0981424366 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 10 [Jatropha curcas]
18 Hb_004994_220 0.0992984907 - - PREDICTED: K(+) efflux antiporter 2, chloroplastic-like isoform X2 [Jatropha curcas]
19 Hb_001959_210 0.0995114772 - - PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
20 Hb_003294_070 0.1005019298 - - hypothetical protein RCOM_1714550 [Ricinus communis]

Gene co-expression network

sample Hb_011671_180 Hb_011671_180 Hb_000497_110 Hb_000497_110 Hb_011671_180--Hb_000497_110 Hb_002000_080 Hb_002000_080 Hb_011671_180--Hb_002000_080 Hb_001009_170 Hb_001009_170 Hb_011671_180--Hb_001009_170 Hb_004920_120 Hb_004920_120 Hb_011671_180--Hb_004920_120 Hb_000252_200 Hb_000252_200 Hb_011671_180--Hb_000252_200 Hb_000031_120 Hb_000031_120 Hb_011671_180--Hb_000031_120 Hb_001157_110 Hb_001157_110 Hb_000497_110--Hb_001157_110 Hb_000497_110--Hb_002000_080 Hb_006642_040 Hb_006642_040 Hb_000497_110--Hb_006642_040 Hb_000497_110--Hb_001009_170 Hb_004837_130 Hb_004837_130 Hb_000497_110--Hb_004837_130 Hb_165928_030 Hb_165928_030 Hb_002000_080--Hb_165928_030 Hb_002481_080 Hb_002481_080 Hb_002000_080--Hb_002481_080 Hb_073973_100 Hb_073973_100 Hb_002000_080--Hb_073973_100 Hb_006907_130 Hb_006907_130 Hb_002000_080--Hb_006907_130 Hb_003294_070 Hb_003294_070 Hb_002000_080--Hb_003294_070 Hb_005490_030 Hb_005490_030 Hb_001009_170--Hb_005490_030 Hb_001009_170--Hb_004920_120 Hb_001959_210 Hb_001959_210 Hb_001009_170--Hb_001959_210 Hb_001619_070 Hb_001619_070 Hb_001009_170--Hb_001619_070 Hb_007044_140 Hb_007044_140 Hb_001009_170--Hb_007044_140 Hb_004920_120--Hb_005490_030 Hb_015934_070 Hb_015934_070 Hb_004920_120--Hb_015934_070 Hb_061090_010 Hb_061090_010 Hb_004920_120--Hb_061090_010 Hb_004218_110 Hb_004218_110 Hb_004920_120--Hb_004218_110 Hb_025240_040 Hb_025240_040 Hb_004920_120--Hb_025240_040 Hb_000260_270 Hb_000260_270 Hb_000252_200--Hb_000260_270 Hb_000252_200--Hb_004837_130 Hb_000023_280 Hb_000023_280 Hb_000252_200--Hb_000023_280 Hb_000866_170 Hb_000866_170 Hb_000252_200--Hb_000866_170 Hb_004994_220 Hb_004994_220 Hb_000252_200--Hb_004994_220 Hb_000137_090 Hb_000137_090 Hb_000031_120--Hb_000137_090 Hb_000031_120--Hb_002000_080 Hb_000139_290 Hb_000139_290 Hb_000031_120--Hb_000139_290 Hb_001009_250 Hb_001009_250 Hb_000031_120--Hb_001009_250 Hb_031340_050 Hb_031340_050 Hb_000031_120--Hb_031340_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
60.0697 32.2175 22.7925 44.3281 49.1394 69.4567
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
91.4472 57.3995 72.2506 102.47 44.5094

CAGE analysis