Hb_011671_430

Information

Type -
Description -
Location Contig11671: 332703-336554
Sequence    

Annotation

kegg
ID rcu:RCOM_1502600
description hypothetical protein
nr
ID XP_012090523.1
description PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JI43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26319 PE=4 SV=1
Gene Ontology
ID GO:0031072
description orange protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05188: 331659-332272 , PASA_asmbl_05189: 332873-336475
cDNA
(Sanger)
(ID:Location)		 051_C11.ab1: 332873-334392

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011671_430 0.0 - - PREDICTED: uncharacterized protein LOC105648668 [Jatropha curcas]
2 Hb_000038_170 0.0521710841 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
3 Hb_004577_020 0.0600785891 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
4 Hb_014497_050 0.0605078983 transcription factor TF Family: bZIP hypothetical protein JCGZ_08021 [Jatropha curcas]
5 Hb_003058_190 0.0605529454 - - PREDICTED: uncharacterized protein LOC105628951 isoform X1 [Jatropha curcas]
6 Hb_004355_020 0.0633180743 - - PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Jatropha curcas]
7 Hb_003158_010 0.0650779873 - - hypothetical protein JCGZ_17361 [Jatropha curcas]
8 Hb_000853_420 0.0655262513 - - PREDICTED: phosphoribosylformylglycinamidine cyclo-ligase, chloroplastic/mitochondrial [Jatropha curcas]
9 Hb_001595_030 0.0661151195 - - PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas]
10 Hb_000915_020 0.0667977242 - - unnamed protein product [Vitis vinifera]
11 Hb_005993_020 0.0686654797 - - PREDICTED: uncharacterized protein LOC105649970 [Jatropha curcas]
12 Hb_000613_090 0.0702929751 - - PREDICTED: uncharacterized protein LOC105641542 isoform X1 [Jatropha curcas]
13 Hb_001680_010 0.0709155962 - - Serine/threonine protein kinase SAPK3 [Medicago truncatula]
14 Hb_002603_120 0.0714815437 - - PREDICTED: nuclear pore complex protein NUP88 [Jatropha curcas]
15 Hb_000630_050 0.0717903489 - - conserved hypothetical protein [Ricinus communis]
16 Hb_010931_120 0.0723793894 - - myosin heavy chain-related family protein [Populus trichocarpa]
17 Hb_001936_020 0.0729182732 - - PREDICTED: phosphatidylinositol 3-kinase, root isoform isoform X1 [Jatropha curcas]
18 Hb_167498_010 0.0732034908 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
19 Hb_000031_060 0.0732655035 - - PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Jatropha curcas]
20 Hb_006922_100 0.0750075083 - - PREDICTED: uncharacterized protein LOC105645470 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_011671_430 Hb_011671_430 Hb_000038_170 Hb_000038_170 Hb_011671_430--Hb_000038_170 Hb_004577_020 Hb_004577_020 Hb_011671_430--Hb_004577_020 Hb_014497_050 Hb_014497_050 Hb_011671_430--Hb_014497_050 Hb_003058_190 Hb_003058_190 Hb_011671_430--Hb_003058_190 Hb_004355_020 Hb_004355_020 Hb_011671_430--Hb_004355_020 Hb_003158_010 Hb_003158_010 Hb_011671_430--Hb_003158_010 Hb_002518_280 Hb_002518_280 Hb_000038_170--Hb_002518_280 Hb_001595_030 Hb_001595_030 Hb_000038_170--Hb_001595_030 Hb_003428_030 Hb_003428_030 Hb_000038_170--Hb_003428_030 Hb_000879_200 Hb_000879_200 Hb_000038_170--Hb_000879_200 Hb_001006_140 Hb_001006_140 Hb_000038_170--Hb_001006_140 Hb_010417_080 Hb_010417_080 Hb_004577_020--Hb_010417_080 Hb_000853_350 Hb_000853_350 Hb_004577_020--Hb_000853_350 Hb_001936_020 Hb_001936_020 Hb_004577_020--Hb_001936_020 Hb_000853_170 Hb_000853_170 Hb_004577_020--Hb_000853_170 Hb_003952_070 Hb_003952_070 Hb_004577_020--Hb_003952_070 Hb_021409_040 Hb_021409_040 Hb_014497_050--Hb_021409_040 Hb_000366_120 Hb_000366_120 Hb_014497_050--Hb_000366_120 Hb_000915_020 Hb_000915_020 Hb_014497_050--Hb_000915_020 Hb_028285_010 Hb_028285_010 Hb_014497_050--Hb_028285_010 Hb_000030_190 Hb_000030_190 Hb_014497_050--Hb_000030_190 Hb_000016_250 Hb_000016_250 Hb_003058_190--Hb_000016_250 Hb_000030_300 Hb_000030_300 Hb_003058_190--Hb_000030_300 Hb_031527_040 Hb_031527_040 Hb_003058_190--Hb_031527_040 Hb_000096_070 Hb_000096_070 Hb_003058_190--Hb_000096_070 Hb_000061_460 Hb_000061_460 Hb_003058_190--Hb_000061_460 Hb_007254_070 Hb_007254_070 Hb_004355_020--Hb_007254_070 Hb_001021_170 Hb_001021_170 Hb_004355_020--Hb_001021_170 Hb_000629_010 Hb_000629_010 Hb_004355_020--Hb_000629_010 Hb_011218_040 Hb_011218_040 Hb_004355_020--Hb_011218_040 Hb_006788_020 Hb_006788_020 Hb_004355_020--Hb_006788_020 Hb_000329_470 Hb_000329_470 Hb_003158_010--Hb_000329_470 Hb_167498_010 Hb_167498_010 Hb_003158_010--Hb_167498_010 Hb_000225_040 Hb_000225_040 Hb_003158_010--Hb_000225_040 Hb_002025_020 Hb_002025_020 Hb_003158_010--Hb_002025_020 Hb_000011_200 Hb_000011_200 Hb_003158_010--Hb_000011_200 Hb_000347_070 Hb_000347_070 Hb_003158_010--Hb_000347_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
45.0179 37.5937 20.5138 24.5871 43.4008 41.469
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
50.3188 33.6789 35.4001 29.466 19.7338

CAGE analysis