Hb_011689_100

Information

Type -
Description -
Location Contig11689: 79456-80082
Sequence    

Annotation

kegg
ID pop:POPTR_0010s02830g
description POPTRDRAFT_657943; hypothetical protein
nr
ID XP_012069456.1
description PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KV76
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02055 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011689_100 0.0 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
2 Hb_002122_030 0.1231184605 - - -
3 Hb_012787_040 0.1274599394 - - PREDICTED: uncharacterized protein LOC105649794 isoform X2 [Jatropha curcas]
4 Hb_001053_200 0.1362745463 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
5 Hb_000610_060 0.139433407 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
6 Hb_000803_060 0.1402546598 - - poly(p)/ATP NAD kinase, putative [Ricinus communis]
7 Hb_002233_070 0.1419830804 - - unnamed protein product [Vitis vinifera]
8 Hb_098160_010 0.1431999791 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
9 Hb_000840_070 0.1467799092 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
10 Hb_000776_050 0.1481730452 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
11 Hb_007007_080 0.1481874568 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004631_110 0.1498517147 - - ring finger protein, putative [Ricinus communis]
13 Hb_011360_090 0.1504141967 - - PREDICTED: uncharacterized protein LOC105644141 [Jatropha curcas]
14 Hb_033149_020 0.1509237401 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
15 Hb_017857_010 0.1534537777 - - -
16 Hb_001662_170 0.1536173617 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
17 Hb_000805_040 0.1537638282 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
18 Hb_003752_120 0.1547987758 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X1 [Jatropha curcas]
19 Hb_158696_010 0.156854003 - - PREDICTED: putative disease resistance protein RGA4, partial [Jatropha curcas]
20 Hb_003126_020 0.1578729836 - - Oligopeptide transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_011689_100 Hb_011689_100 Hb_002122_030 Hb_002122_030 Hb_011689_100--Hb_002122_030 Hb_012787_040 Hb_012787_040 Hb_011689_100--Hb_012787_040 Hb_001053_200 Hb_001053_200 Hb_011689_100--Hb_001053_200 Hb_000610_060 Hb_000610_060 Hb_011689_100--Hb_000610_060 Hb_000803_060 Hb_000803_060 Hb_011689_100--Hb_000803_060 Hb_002233_070 Hb_002233_070 Hb_011689_100--Hb_002233_070 Hb_001246_160 Hb_001246_160 Hb_002122_030--Hb_001246_160 Hb_000009_200 Hb_000009_200 Hb_002122_030--Hb_000009_200 Hb_000805_040 Hb_000805_040 Hb_002122_030--Hb_000805_040 Hb_005714_100 Hb_005714_100 Hb_002122_030--Hb_005714_100 Hb_004712_160 Hb_004712_160 Hb_002122_030--Hb_004712_160 Hb_003752_120 Hb_003752_120 Hb_012787_040--Hb_003752_120 Hb_012787_040--Hb_000803_060 Hb_001662_170 Hb_001662_170 Hb_012787_040--Hb_001662_170 Hb_011360_090 Hb_011360_090 Hb_012787_040--Hb_011360_090 Hb_158696_010 Hb_158696_010 Hb_012787_040--Hb_158696_010 Hb_004106_010 Hb_004106_010 Hb_012787_040--Hb_004106_010 Hb_008103_100 Hb_008103_100 Hb_001053_200--Hb_008103_100 Hb_001053_200--Hb_001662_170 Hb_001951_240 Hb_001951_240 Hb_001053_200--Hb_001951_240 Hb_000649_300 Hb_000649_300 Hb_001053_200--Hb_000649_300 Hb_005496_160 Hb_005496_160 Hb_001053_200--Hb_005496_160 Hb_004032_310 Hb_004032_310 Hb_001053_200--Hb_004032_310 Hb_033149_020 Hb_033149_020 Hb_000610_060--Hb_033149_020 Hb_007574_050 Hb_007574_050 Hb_000610_060--Hb_007574_050 Hb_000610_060--Hb_008103_100 Hb_000610_060--Hb_004712_160 Hb_000610_060--Hb_001053_200 Hb_006414_020 Hb_006414_020 Hb_000803_060--Hb_006414_020 Hb_001258_150 Hb_001258_150 Hb_000803_060--Hb_001258_150 Hb_001489_120 Hb_001489_120 Hb_000803_060--Hb_001489_120 Hb_000803_060--Hb_003752_120 Hb_000803_060--Hb_004032_310 Hb_003126_020 Hb_003126_020 Hb_002233_070--Hb_003126_020 Hb_000117_060 Hb_000117_060 Hb_002233_070--Hb_000117_060 Hb_056012_010 Hb_056012_010 Hb_002233_070--Hb_056012_010 Hb_002233_070--Hb_001662_170 Hb_009476_150 Hb_009476_150 Hb_002233_070--Hb_009476_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
75.3432 397.589 148.722 156.048 12.3588 14.806
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.2936 16.2157 11.5204 72.267 44.4944

CAGE analysis