Hb_011709_010

Information

Type -
Description -
Location Contig11709: 1337-2717
Sequence    

Annotation

kegg
ID vvi:100854840
description probably inactive leucine-rich repeat receptor-like protein kinase At3g28040
nr
ID XP_012075347.1
description PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KSP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09439 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011709_010 0.0 - - PREDICTED: phytosulfokine receptor 1-like [Jatropha curcas]
2 Hb_010193_020 0.069547404 - - PREDICTED: NADH--cytochrome b5 reductase 1-like [Jatropha curcas]
3 Hb_049955_010 0.0978666332 - - hypothetical protein EUGRSUZ_B00742 [Eucalyptus grandis]
4 Hb_138585_010 0.1015181588 transcription factor TF Family: NAC PREDICTED: NAC transcription factor ONAC010 [Jatropha curcas]
5 Hb_009252_070 0.1053464114 - - hypothetical protein JCGZ_11488 [Jatropha curcas]
6 Hb_005269_060 0.1080161587 - - PREDICTED: rac-like GTP-binding protein RAC2 [Cicer arietinum]
7 Hb_057862_010 0.1087585719 - - protein binding protein, putative [Ricinus communis]
8 Hb_000866_400 0.1123965577 - - -
9 Hb_001534_140 0.1149770721 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
10 Hb_003968_030 0.1166661196 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_011344_040 0.116693173 - - PREDICTED: 21 kDa protein [Jatropha curcas]
12 Hb_031579_010 0.1186792673 - - JHL22C18.10 [Jatropha curcas]
13 Hb_185608_010 0.1189428092 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
14 Hb_004943_020 0.1227620499 - - cationic amino acid transporter, putative [Ricinus communis]
15 Hb_002740_140 0.1227754009 - - hypothetical protein L484_022679 [Morus notabilis]
16 Hb_007760_020 0.1248907164 - - PREDICTED: expansin-A1 [Populus euphratica]
17 Hb_000343_070 0.1257796899 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
18 Hb_061256_020 0.1262054925 - - PREDICTED: UPF0392 protein RCOM_0530710 [Jatropha curcas]
19 Hb_000910_060 0.1277238175 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
20 Hb_011082_030 0.1288680827 - - hypothetical protein RCOM_0852210 [Ricinus communis]

Gene co-expression network

sample Hb_011709_010 Hb_011709_010 Hb_010193_020 Hb_010193_020 Hb_011709_010--Hb_010193_020 Hb_049955_010 Hb_049955_010 Hb_011709_010--Hb_049955_010 Hb_138585_010 Hb_138585_010 Hb_011709_010--Hb_138585_010 Hb_009252_070 Hb_009252_070 Hb_011709_010--Hb_009252_070 Hb_005269_060 Hb_005269_060 Hb_011709_010--Hb_005269_060 Hb_057862_010 Hb_057862_010 Hb_011709_010--Hb_057862_010 Hb_011344_040 Hb_011344_040 Hb_010193_020--Hb_011344_040 Hb_185608_010 Hb_185608_010 Hb_010193_020--Hb_185608_010 Hb_010193_020--Hb_057862_010 Hb_010193_020--Hb_049955_010 Hb_010193_020--Hb_005269_060 Hb_049955_010--Hb_185608_010 Hb_162450_010 Hb_162450_010 Hb_049955_010--Hb_162450_010 Hb_049955_010--Hb_005269_060 Hb_049955_010--Hb_057862_010 Hb_000343_070 Hb_000343_070 Hb_049955_010--Hb_000343_070 Hb_005532_080 Hb_005532_080 Hb_049955_010--Hb_005532_080 Hb_004804_010 Hb_004804_010 Hb_138585_010--Hb_004804_010 Hb_006846_040 Hb_006846_040 Hb_138585_010--Hb_006846_040 Hb_001534_140 Hb_001534_140 Hb_138585_010--Hb_001534_140 Hb_000417_210 Hb_000417_210 Hb_138585_010--Hb_000417_210 Hb_138585_010--Hb_009252_070 Hb_000903_040 Hb_000903_040 Hb_138585_010--Hb_000903_040 Hb_047612_010 Hb_047612_010 Hb_009252_070--Hb_047612_010 Hb_000368_050 Hb_000368_050 Hb_009252_070--Hb_000368_050 Hb_009252_070--Hb_005269_060 Hb_004650_110 Hb_004650_110 Hb_009252_070--Hb_004650_110 Hb_000103_440 Hb_000103_440 Hb_009252_070--Hb_000103_440 Hb_005269_060--Hb_000343_070 Hb_001278_120 Hb_001278_120 Hb_005269_060--Hb_001278_120 Hb_005269_060--Hb_011344_040 Hb_004943_020 Hb_004943_020 Hb_005269_060--Hb_004943_020 Hb_010172_040 Hb_010172_040 Hb_005269_060--Hb_010172_040 Hb_057862_010--Hb_185608_010 Hb_057862_010--Hb_162450_010 Hb_002740_140 Hb_002740_140 Hb_057862_010--Hb_002740_140 Hb_057862_010--Hb_011344_040 Hb_093084_030 Hb_093084_030 Hb_057862_010--Hb_093084_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.212454 0.83599 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0682532 0.479806

CAGE analysis