Hb_011794_100

Information

Type -
Description -
Location Contig11794: 63628-65663
Sequence    

Annotation

kegg
ID pop:POPTR_0002s16040g
description POPTRDRAFT_755286; hypothetical protein
nr
ID XP_012083842.1
description PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
swissprot
ID Q54H46
description Probable serine/threonine-protein kinase drkA OS=Dictyostelium discoideum GN=drkA PE=3 SV=1
trembl
ID A0A067K0Q0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14409 PE=4 SV=1
Gene Ontology
ID GO:0016301
description seven transmembrane domain-containing tyrosine-protein kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011794_100 0.0 - - PREDICTED: seven transmembrane domain-containing tyrosine-protein kinase 1-like [Jatropha curcas]
2 Hb_001439_020 0.2185898447 - - PREDICTED: uncharacterized protein LOC105644112 [Jatropha curcas]
3 Hb_003540_100 0.2221390983 - - ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_002401_020 0.24502227 - - PREDICTED: protein argonaute 16 isoform X2 [Jatropha curcas]
5 Hb_006922_070 0.2798014943 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
6 Hb_000139_270 0.2873176071 - - hypothetical protein POPTR_0008s14890g [Populus trichocarpa]
7 Hb_000668_130 0.2950891203 - - -
8 Hb_002186_070 0.2959373984 - - kinase, putative [Ricinus communis]
9 Hb_002085_050 0.2960720511 - - PREDICTED: beta-galactosidase 8 [Jatropha curcas]
10 Hb_004357_060 0.3000456213 - - PREDICTED: uncharacterized protein At4g22758 [Jatropha curcas]
11 Hb_004374_160 0.3003310486 transcription factor TF Family: bHLH hypothetical protein JCGZ_20587 [Jatropha curcas]
12 Hb_005154_080 0.3011028165 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105640764 [Jatropha curcas]
13 Hb_009316_050 0.3033745194 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
14 Hb_006775_110 0.3078746174 - - PREDICTED: uncharacterized protein LOC105649734 [Jatropha curcas]
15 Hb_002085_080 0.3080627105 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 68-like [Jatropha curcas]
16 Hb_006810_020 0.3141948076 - - PREDICTED: NADPH:quinone oxidoreductase-like [Jatropha curcas]
17 Hb_000230_170 0.3142024224 - - PREDICTED: histidine-containing phosphotransfer protein 1 [Jatropha curcas]
18 Hb_003052_020 0.3148350691 - - PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X1 [Jatropha curcas]
19 Hb_177019_010 0.3168216838 - - Uncharacterized protein TCM_004012 [Theobroma cacao]
20 Hb_006420_010 0.3206064257 - - PREDICTED: uncharacterized protein LOC105649815 [Jatropha curcas]

Gene co-expression network

sample Hb_011794_100 Hb_011794_100 Hb_001439_020 Hb_001439_020 Hb_011794_100--Hb_001439_020 Hb_003540_100 Hb_003540_100 Hb_011794_100--Hb_003540_100 Hb_002401_020 Hb_002401_020 Hb_011794_100--Hb_002401_020 Hb_006922_070 Hb_006922_070 Hb_011794_100--Hb_006922_070 Hb_000139_270 Hb_000139_270 Hb_011794_100--Hb_000139_270 Hb_000668_130 Hb_000668_130 Hb_011794_100--Hb_000668_130 Hb_001439_020--Hb_003540_100 Hb_001439_020--Hb_006922_070 Hb_009316_050 Hb_009316_050 Hb_001439_020--Hb_009316_050 Hb_004374_160 Hb_004374_160 Hb_001439_020--Hb_004374_160 Hb_002170_080 Hb_002170_080 Hb_001439_020--Hb_002170_080 Hb_003540_100--Hb_006922_070 Hb_003540_100--Hb_009316_050 Hb_003540_100--Hb_004374_160 Hb_003540_100--Hb_002170_080 Hb_069338_010 Hb_069338_010 Hb_002401_020--Hb_069338_010 Hb_001124_200 Hb_001124_200 Hb_002401_020--Hb_001124_200 Hb_000005_140 Hb_000005_140 Hb_002401_020--Hb_000005_140 Hb_053272_010 Hb_053272_010 Hb_002401_020--Hb_053272_010 Hb_009662_070 Hb_009662_070 Hb_002401_020--Hb_009662_070 Hb_006922_070--Hb_009316_050 Hb_024570_030 Hb_024570_030 Hb_006922_070--Hb_024570_030 Hb_005154_080 Hb_005154_080 Hb_006922_070--Hb_005154_080 Hb_006922_070--Hb_002170_080 Hb_000612_090 Hb_000612_090 Hb_000139_270--Hb_000612_090 Hb_022137_050 Hb_022137_050 Hb_000139_270--Hb_022137_050 Hb_002235_110 Hb_002235_110 Hb_000139_270--Hb_002235_110 Hb_074197_030 Hb_074197_030 Hb_000139_270--Hb_074197_030 Hb_005493_010 Hb_005493_010 Hb_000139_270--Hb_005493_010 Hb_006420_010 Hb_006420_010 Hb_000139_270--Hb_006420_010 Hb_003687_220 Hb_003687_220 Hb_000668_130--Hb_003687_220 Hb_177019_010 Hb_177019_010 Hb_000668_130--Hb_177019_010 Hb_000416_030 Hb_000416_030 Hb_000668_130--Hb_000416_030 Hb_001226_190 Hb_001226_190 Hb_000668_130--Hb_001226_190 Hb_002000_120 Hb_002000_120 Hb_000668_130--Hb_002000_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0649066 0.0834186 0.0416432 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0754349 0 0.0617487 0.146769

CAGE analysis