Hb_011805_060

Information

Type -
Description -
Location Contig11805: 31097-33799
Sequence    

Annotation

kegg
ID tcc:TCM_005980
description Disease resistance family protein / LRR family protein, putative
nr
ID XP_012065987.1
description PREDICTED: receptor-like protein 12 [Jatropha curcas]
swissprot
ID C0LGQ5
description LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1
trembl
ID A0A067LG62
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26672 PE=4 SV=1
Gene Ontology
ID GO:0005515
description receptor-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011805_060 0.0 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
2 Hb_002475_110 0.1087529516 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
3 Hb_000610_030 0.1121347948 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
4 Hb_013726_100 0.1177353127 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
5 Hb_002311_490 0.1194159702 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
6 Hb_011671_290 0.1200394851 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
7 Hb_002639_090 0.1211932569 - - hypothetical protein JCGZ_08134 [Jatropha curcas]
8 Hb_027214_060 0.1231313615 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
9 Hb_025477_030 0.1249182234 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
10 Hb_002572_060 0.1259748423 - - conserved hypothetical protein [Ricinus communis]
11 Hb_009393_010 0.1300536834 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
12 Hb_000227_410 0.1303969425 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
13 Hb_010417_120 0.1308590352 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001168_100 0.1325872671 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2-like [Citrus sinensis]
15 Hb_008931_020 0.134378018 - - Receptor like protein 46, putative [Theobroma cacao]
16 Hb_000256_050 0.1411400652 - - chitinase, putative [Ricinus communis]
17 Hb_000414_100 0.1437522013 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
18 Hb_174829_040 0.1464120296 - - PREDICTED: probable calcium-binding protein CML45 [Jatropha curcas]
19 Hb_000336_160 0.1464857124 - - ATP binding protein, putative [Ricinus communis]
20 Hb_000210_150 0.1474195508 - - PREDICTED: protein YLS9-like [Jatropha curcas]

Gene co-expression network

sample Hb_011805_060 Hb_011805_060 Hb_002475_110 Hb_002475_110 Hb_011805_060--Hb_002475_110 Hb_000610_030 Hb_000610_030 Hb_011805_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_011805_060--Hb_013726_100 Hb_002311_490 Hb_002311_490 Hb_011805_060--Hb_002311_490 Hb_011671_290 Hb_011671_290 Hb_011805_060--Hb_011671_290 Hb_002639_090 Hb_002639_090 Hb_011805_060--Hb_002639_090 Hb_002475_110--Hb_013726_100 Hb_027214_060 Hb_027214_060 Hb_002475_110--Hb_027214_060 Hb_000227_410 Hb_000227_410 Hb_002475_110--Hb_000227_410 Hb_025477_030 Hb_025477_030 Hb_002475_110--Hb_025477_030 Hb_001623_020 Hb_001623_020 Hb_002475_110--Hb_001623_020 Hb_000904_090 Hb_000904_090 Hb_002475_110--Hb_000904_090 Hb_000610_030--Hb_011671_290 Hb_002572_060 Hb_002572_060 Hb_000610_030--Hb_002572_060 Hb_000610_030--Hb_013726_100 Hb_000256_050 Hb_000256_050 Hb_000610_030--Hb_000256_050 Hb_000610_030--Hb_002475_110 Hb_000610_030--Hb_001623_020 Hb_013726_100--Hb_000256_050 Hb_013726_100--Hb_001623_020 Hb_013726_100--Hb_002572_060 Hb_013726_100--Hb_025477_030 Hb_009683_060 Hb_009683_060 Hb_013726_100--Hb_009683_060 Hb_000506_140 Hb_000506_140 Hb_002311_490--Hb_000506_140 Hb_000563_460 Hb_000563_460 Hb_002311_490--Hb_000563_460 Hb_158123_010 Hb_158123_010 Hb_002311_490--Hb_158123_010 Hb_174829_040 Hb_174829_040 Hb_002311_490--Hb_174829_040 Hb_000465_330 Hb_000465_330 Hb_002311_490--Hb_000465_330 Hb_035391_010 Hb_035391_010 Hb_002311_490--Hb_035391_010 Hb_011671_290--Hb_002572_060 Hb_008931_020 Hb_008931_020 Hb_011671_290--Hb_008931_020 Hb_000959_290 Hb_000959_290 Hb_011671_290--Hb_000959_290 Hb_000414_100 Hb_000414_100 Hb_011671_290--Hb_000414_100 Hb_004994_070 Hb_004994_070 Hb_011671_290--Hb_004994_070 Hb_000840_230 Hb_000840_230 Hb_002639_090--Hb_000840_230 Hb_000072_310 Hb_000072_310 Hb_002639_090--Hb_000072_310 Hb_077562_010 Hb_077562_010 Hb_002639_090--Hb_077562_010 Hb_052530_030 Hb_052530_030 Hb_002639_090--Hb_052530_030 Hb_009393_010 Hb_009393_010 Hb_002639_090--Hb_009393_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.014314 3.57196 0.143149 0.657198 0.0143283 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0243957 0.0405684 0.0816156

CAGE analysis