Hb_011861_110

Information

Type -
Description -
Location Contig11861: 113254-113832
Sequence    

Annotation

kegg
ID rcu:RCOM_0011450
description hypothetical protein
nr
ID XP_012075284.1
description PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LFF3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06086 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011861_110 0.0 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
2 Hb_002461_080 0.1727827575 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
3 Hb_010921_090 0.1789183868 - - hypothetical protein JCGZ_04800 [Jatropha curcas]
4 Hb_133636_010 0.2112718559 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
5 Hb_000088_160 0.2131351248 - - PREDICTED: uncharacterized protein LOC105629775 [Jatropha curcas]
6 Hb_007773_030 0.2132311665 - - -
7 Hb_002783_320 0.2147714228 transcription factor TF Family: E2F-DP PREDICTED: transcription factor E2FC isoform X1 [Jatropha curcas]
8 Hb_001373_080 0.2150916586 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
9 Hb_007163_140 0.2200411813 transcription factor TF Family: bHLH hypothetical protein JCGZ_12606 [Jatropha curcas]
10 Hb_010578_050 0.2221813615 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
11 Hb_034342_010 0.2240824325 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001424_080 0.2274677539 - - PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Jatropha curcas]
13 Hb_001373_020 0.2288882397 - - -
14 Hb_002553_160 0.2294007635 - - PREDICTED: uncharacterized protein LOC104590935 [Nelumbo nucifera]
15 Hb_111582_010 0.2362881446 - - hypothetical protein POPTR_0303s002201g, partial [Populus trichocarpa]
16 Hb_003556_060 0.2370971671 - - -
17 Hb_000676_030 0.239066253 - - PREDICTED: probable mitochondrial chaperone BCS1-B [Jatropha curcas]
18 Hb_001584_010 0.2417074924 - - kelch repeat protein, putative [Ricinus communis]
19 Hb_126077_020 0.2419050512 - - Kinase family protein with leucine-rich repeat domain [Theobroma cacao]
20 Hb_000030_260 0.2448861189 desease resistance Gene Name: NB-ARC leucine-rich repeat containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_011861_110 Hb_011861_110 Hb_002461_080 Hb_002461_080 Hb_011861_110--Hb_002461_080 Hb_010921_090 Hb_010921_090 Hb_011861_110--Hb_010921_090 Hb_133636_010 Hb_133636_010 Hb_011861_110--Hb_133636_010 Hb_000088_160 Hb_000088_160 Hb_011861_110--Hb_000088_160 Hb_007773_030 Hb_007773_030 Hb_011861_110--Hb_007773_030 Hb_002783_320 Hb_002783_320 Hb_011861_110--Hb_002783_320 Hb_000181_450 Hb_000181_450 Hb_002461_080--Hb_000181_450 Hb_008554_010 Hb_008554_010 Hb_002461_080--Hb_008554_010 Hb_001373_080 Hb_001373_080 Hb_002461_080--Hb_001373_080 Hb_001131_070 Hb_001131_070 Hb_002461_080--Hb_001131_070 Hb_073096_010 Hb_073096_010 Hb_002461_080--Hb_073096_010 Hb_000610_020 Hb_000610_020 Hb_010921_090--Hb_000610_020 Hb_001486_150 Hb_001486_150 Hb_010921_090--Hb_001486_150 Hb_004007_120 Hb_004007_120 Hb_010921_090--Hb_004007_120 Hb_004162_010 Hb_004162_010 Hb_010921_090--Hb_004162_010 Hb_010921_090--Hb_073096_010 Hb_003299_010 Hb_003299_010 Hb_133636_010--Hb_003299_010 Hb_000844_010 Hb_000844_010 Hb_133636_010--Hb_000844_010 Hb_133636_010--Hb_002783_320 Hb_005157_010 Hb_005157_010 Hb_133636_010--Hb_005157_010 Hb_011909_030 Hb_011909_030 Hb_133636_010--Hb_011909_030 Hb_133636_010--Hb_007773_030 Hb_000521_300 Hb_000521_300 Hb_000088_160--Hb_000521_300 Hb_007618_010 Hb_007618_010 Hb_000088_160--Hb_007618_010 Hb_000088_160--Hb_133636_010 Hb_000088_160--Hb_002783_320 Hb_001454_340 Hb_001454_340 Hb_000088_160--Hb_001454_340 Hb_164010_090 Hb_164010_090 Hb_000088_160--Hb_164010_090 Hb_007441_060 Hb_007441_060 Hb_007773_030--Hb_007441_060 Hb_010578_050 Hb_010578_050 Hb_007773_030--Hb_010578_050 Hb_000035_300 Hb_000035_300 Hb_007773_030--Hb_000035_300 Hb_007773_030--Hb_002783_320 Hb_001584_010 Hb_001584_010 Hb_007773_030--Hb_001584_010 Hb_002783_320--Hb_010578_050 Hb_000030_260 Hb_000030_260 Hb_002783_320--Hb_000030_260 Hb_000676_030 Hb_000676_030 Hb_002783_320--Hb_000676_030 Hb_017866_020 Hb_017866_020 Hb_002783_320--Hb_017866_020 Hb_011970_040 Hb_011970_040 Hb_002783_320--Hb_011970_040 Hb_004195_170 Hb_004195_170 Hb_002783_320--Hb_004195_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.171819 0.0371919 0.0457105 0 0.0408736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.137621 0

CAGE analysis