Hb_011909_110

Information

Type -
Description -
Location Contig11909: 98144-100832
Sequence    

Annotation

kegg
ID rcu:RCOM_1256160
description hypothetical protein
nr
ID XP_012071182.1
description PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L4D9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00721 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011909_110 0.0 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
2 Hb_001959_130 0.2101063239 - - transporter, putative [Ricinus communis]
3 Hb_015430_010 0.2103186266 - - PREDICTED: uncharacterized protein LOC105125506 isoform X2 [Populus euphratica]
4 Hb_002043_120 0.2123197359 - - protein with unknown function [Ricinus communis]
5 Hb_000167_030 0.2170882338 - - PREDICTED: uncharacterized protein LOC105641111 isoform X1 [Jatropha curcas]
6 Hb_000613_160 0.2209145465 - - coated vesicle membrane protein, putative [Ricinus communis]
7 Hb_008215_030 0.2284683844 - - hypothetical protein 3 [Hevea brasiliensis]
8 Hb_003007_010 0.2293005716 - - PREDICTED: probable peptide/nitrate transporter At3g43790 isoform X1 [Populus euphratica]
9 Hb_004218_210 0.2319485998 transcription factor TF Family: Orphans hypothetical protein JCGZ_24525 [Jatropha curcas]
10 Hb_008066_030 0.2349890632 - - PREDICTED: uncharacterized protein LOC105631333 [Jatropha curcas]
11 Hb_116420_020 0.2360873373 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
12 Hb_000453_300 0.2391603154 - - latex cystatin [Hevea brasiliensis]
13 Hb_005656_190 0.2391927548 - - proteasome subunit beta type 6,9, putative [Ricinus communis]
14 Hb_001348_120 0.2394344512 - - Phloem protein 2-B10, putative [Theobroma cacao]
15 Hb_002704_050 0.2401537455 - - cysteine-type peptidase, putative [Ricinus communis]
16 Hb_012022_100 0.2447388532 - - CPRD49 family protein [Populus trichocarpa]
17 Hb_000749_240 0.2455970475 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004209_030 0.2469948955 - - PREDICTED: (DL)-glycerol-3-phosphatase 2 isoform X1 [Jatropha curcas]
19 Hb_000676_340 0.247828543 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_001158_190 0.2497109812 - - PREDICTED: bidirectional sugar transporter SWEET10-like [Jatropha curcas]

Gene co-expression network

sample Hb_011909_110 Hb_011909_110 Hb_001959_130 Hb_001959_130 Hb_011909_110--Hb_001959_130 Hb_015430_010 Hb_015430_010 Hb_011909_110--Hb_015430_010 Hb_002043_120 Hb_002043_120 Hb_011909_110--Hb_002043_120 Hb_000167_030 Hb_000167_030 Hb_011909_110--Hb_000167_030 Hb_000613_160 Hb_000613_160 Hb_011909_110--Hb_000613_160 Hb_008215_030 Hb_008215_030 Hb_011909_110--Hb_008215_030 Hb_000749_240 Hb_000749_240 Hb_001959_130--Hb_000749_240 Hb_007943_190 Hb_007943_190 Hb_001959_130--Hb_007943_190 Hb_000920_370 Hb_000920_370 Hb_001959_130--Hb_000920_370 Hb_002774_050 Hb_002774_050 Hb_001959_130--Hb_002774_050 Hb_000676_340 Hb_000676_340 Hb_001959_130--Hb_000676_340 Hb_003581_300 Hb_003581_300 Hb_015430_010--Hb_003581_300 Hb_001105_090 Hb_001105_090 Hb_015430_010--Hb_001105_090 Hb_006018_060 Hb_006018_060 Hb_015430_010--Hb_006018_060 Hb_000178_120 Hb_000178_120 Hb_015430_010--Hb_000178_120 Hb_002042_080 Hb_002042_080 Hb_015430_010--Hb_002042_080 Hb_009778_040 Hb_009778_040 Hb_015430_010--Hb_009778_040 Hb_012022_100 Hb_012022_100 Hb_002043_120--Hb_012022_100 Hb_002704_050 Hb_002704_050 Hb_002043_120--Hb_002704_050 Hb_000792_120 Hb_000792_120 Hb_002043_120--Hb_000792_120 Hb_000592_060 Hb_000592_060 Hb_002043_120--Hb_000592_060 Hb_002043_120--Hb_000613_160 Hb_001579_140 Hb_001579_140 Hb_002043_120--Hb_001579_140 Hb_007218_150 Hb_007218_150 Hb_000167_030--Hb_007218_150 Hb_000167_030--Hb_009778_040 Hb_116420_020 Hb_116420_020 Hb_000167_030--Hb_116420_020 Hb_005663_120 Hb_005663_120 Hb_000167_030--Hb_005663_120 Hb_001232_140 Hb_001232_140 Hb_000167_030--Hb_001232_140 Hb_032969_030 Hb_032969_030 Hb_000167_030--Hb_032969_030 Hb_000788_080 Hb_000788_080 Hb_000613_160--Hb_000788_080 Hb_005000_160 Hb_005000_160 Hb_000613_160--Hb_005000_160 Hb_001507_070 Hb_001507_070 Hb_000613_160--Hb_001507_070 Hb_000613_160--Hb_002704_050 Hb_001276_060 Hb_001276_060 Hb_000613_160--Hb_001276_060 Hb_000979_250 Hb_000979_250 Hb_000613_160--Hb_000979_250 Hb_008215_030--Hb_009778_040 Hb_008215_030--Hb_015430_010 Hb_008215_030--Hb_001105_090 Hb_008215_030--Hb_116420_020 Hb_000031_080 Hb_000031_080 Hb_008215_030--Hb_000031_080 Hb_000809_060 Hb_000809_060 Hb_008215_030--Hb_000809_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0251585 0.250634 0.288454 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.66447 1.26383 0.990022 0.109192 0.0916386

CAGE analysis