Hb_011918_080

Information

Type -
Description -
Location Contig11918: 112470-136790
Sequence    

Annotation

kegg
ID rcu:RCOM_0054220
description kinase, putative (EC:2.7.11.13)
nr
ID XP_012064629.1
description PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]
swissprot
ID F4J6F6
description Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana GN=IREH1 PE=1 SV=1
trembl
ID A0A067L7C1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22916 PE=4 SV=1
Gene Ontology
ID GO:0004697
description probable serine threonine protein kinase ireh1 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05677: 112598-136592 , PASA_asmbl_05678: 112598-136334 , PASA_asmbl_05680: 136881-136993
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011918_080 0.0 - - PREDICTED: probable serine/threonine protein kinase IREH1 isoform X2 [Jatropha curcas]
2 Hb_007558_140 0.0506190922 - - PREDICTED: phospholipid-transporting ATPase 1-like [Jatropha curcas]
3 Hb_002477_160 0.0635552668 - - hypothetical protein L484_013453 [Morus notabilis]
4 Hb_015306_020 0.067179354 transcription factor TF Family: MYB-related PREDICTED: dnaJ homolog subfamily C member 2 [Jatropha curcas]
5 Hb_000110_160 0.0724179601 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004046_010 0.073398444 - - PREDICTED: uncharacterized protein LOC105632478 isoform X2 [Jatropha curcas]
7 Hb_001329_300 0.0734183535 - - PREDICTED: L-cysteine desulfhydrase [Jatropha curcas]
8 Hb_182026_020 0.0746750173 - - PREDICTED: SUN domain-containing protein 3-like [Jatropha curcas]
9 Hb_001085_170 0.0749499947 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform X1 [Jatropha curcas]
10 Hb_000567_260 0.075548541 - - BnaA09g41440D [Brassica napus]
11 Hb_001248_130 0.0758688737 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
12 Hb_000120_950 0.0768021243 - - PREDICTED: protein GRIP [Jatropha curcas]
13 Hb_001454_210 0.0784486358 - - PREDICTED: uncharacterized protein LOC105643435 [Jatropha curcas]
14 Hb_000754_060 0.0796888388 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 69 isoform X1 [Jatropha curcas]
15 Hb_002307_100 0.0797269429 - - PREDICTED: protein transport protein sec23-1 [Jatropha curcas]
16 Hb_000179_210 0.0809226027 - - PREDICTED: uncharacterized protein LOC105637927 [Jatropha curcas]
17 Hb_002890_340 0.0836737348 - - PREDICTED: uncharacterized protein LOC105631583 isoform X2 [Jatropha curcas]
18 Hb_000614_230 0.0847433925 - - PREDICTED: F-box protein SKIP14 [Jatropha curcas]
19 Hb_000418_100 0.0858734067 - - PREDICTED: F-box protein SKIP19-like [Gossypium raimondii]
20 Hb_002835_410 0.087062126 - - clathrin coat assembly protein ap-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_011918_080 Hb_011918_080 Hb_007558_140 Hb_007558_140 Hb_011918_080--Hb_007558_140 Hb_002477_160 Hb_002477_160 Hb_011918_080--Hb_002477_160 Hb_015306_020 Hb_015306_020 Hb_011918_080--Hb_015306_020 Hb_000110_160 Hb_000110_160 Hb_011918_080--Hb_000110_160 Hb_004046_010 Hb_004046_010 Hb_011918_080--Hb_004046_010 Hb_001329_300 Hb_001329_300 Hb_011918_080--Hb_001329_300 Hb_007558_140--Hb_002477_160 Hb_002307_100 Hb_002307_100 Hb_007558_140--Hb_002307_100 Hb_001085_170 Hb_001085_170 Hb_007558_140--Hb_001085_170 Hb_153258_010 Hb_153258_010 Hb_007558_140--Hb_153258_010 Hb_000997_210 Hb_000997_210 Hb_007558_140--Hb_000997_210 Hb_002477_160--Hb_002307_100 Hb_175338_030 Hb_175338_030 Hb_002477_160--Hb_175338_030 Hb_000120_950 Hb_000120_950 Hb_002477_160--Hb_000120_950 Hb_000754_060 Hb_000754_060 Hb_002477_160--Hb_000754_060 Hb_001454_210 Hb_001454_210 Hb_015306_020--Hb_001454_210 Hb_002890_340 Hb_002890_340 Hb_015306_020--Hb_002890_340 Hb_028872_140 Hb_028872_140 Hb_015306_020--Hb_028872_140 Hb_001789_090 Hb_001789_090 Hb_015306_020--Hb_001789_090 Hb_009111_050 Hb_009111_050 Hb_015306_020--Hb_009111_050 Hb_015306_020--Hb_004046_010 Hb_000110_160--Hb_001329_300 Hb_008066_010 Hb_008066_010 Hb_000110_160--Hb_008066_010 Hb_001051_100 Hb_001051_100 Hb_000110_160--Hb_001051_100 Hb_000567_260 Hb_000567_260 Hb_000110_160--Hb_000567_260 Hb_178968_110 Hb_178968_110 Hb_000110_160--Hb_178968_110 Hb_005062_070 Hb_005062_070 Hb_004046_010--Hb_005062_070 Hb_004046_010--Hb_002890_340 Hb_004046_010--Hb_002477_160 Hb_000446_090 Hb_000446_090 Hb_004046_010--Hb_000446_090 Hb_001329_300--Hb_000567_260 Hb_002006_090 Hb_002006_090 Hb_001329_300--Hb_002006_090 Hb_000614_230 Hb_000614_230 Hb_001329_300--Hb_000614_230 Hb_001329_300--Hb_008066_010 Hb_008695_210 Hb_008695_210 Hb_001329_300--Hb_008695_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
48.6257 20.7266 8.86675 18.2655 56.7699 55.2049
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
49.5273 38.245 77.4453 23.6222 14.4009

CAGE analysis