Hb_012098_170

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig12098: 103132-113342
Sequence    

Annotation

kegg
ID tcc:TCM_005823
description Cc-nbs-lrr resistance protein, putative isoform 1
nr
ID KDP43587.1
description hypothetical protein JCGZ_16874 [Jatropha curcas]
swissprot
ID P26337
description Putative adenylate cyclase regulatory protein OS=Trypanosoma equiperdum GN=ESAG8C PE=2 SV=1
trembl
ID A0A067L582
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16874 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012098_170 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_16874 [Jatropha curcas]
2 Hb_067034_030 0.1431321471 - - ATP-binding cassette transporter, putative [Ricinus communis]
3 Hb_001114_070 0.1610530412 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein At1g58400 [Jatropha curcas]
4 Hb_007919_040 0.1767300862 - - PREDICTED: protein LYK5 [Jatropha curcas]
5 Hb_006501_170 0.192909789 - - hypothetical protein JCGZ_07371 [Jatropha curcas]
6 Hb_006573_300 0.1979895098 - - ATP binding protein, putative [Ricinus communis]
7 Hb_000645_240 0.1984637555 - - AMP dependent ligase, putative [Ricinus communis]
8 Hb_020805_170 0.2025345298 - - PREDICTED: F-box protein CPR30-like [Jatropha curcas]
9 Hb_003185_100 0.2134980813 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
10 Hb_001195_730 0.2164909861 - - PREDICTED: protein LYK5-like [Jatropha curcas]
11 Hb_003120_040 0.2178590888 - - PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Jatropha curcas]
12 Hb_000679_240 0.2183621868 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Jatropha curcas]
13 Hb_004195_190 0.2197791046 - - WD-repeat protein, putative [Ricinus communis]
14 Hb_000521_300 0.2219740557 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Jatropha curcas]
15 Hb_004195_110 0.2222971367 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
16 Hb_000928_040 0.2225674236 - - cytochrome P450, putative [Ricinus communis]
17 Hb_011716_050 0.2265808829 - - serine acetyltransferase [Hevea brasiliensis]
18 Hb_000853_060 0.2273911544 - - PREDICTED: myelin transcription factor 1-like isoform X1 [Jatropha curcas]
19 Hb_001248_030 0.2282031031 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000840_040 0.2285092809 - - monoxygenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_012098_170 Hb_012098_170 Hb_067034_030 Hb_067034_030 Hb_012098_170--Hb_067034_030 Hb_001114_070 Hb_001114_070 Hb_012098_170--Hb_001114_070 Hb_007919_040 Hb_007919_040 Hb_012098_170--Hb_007919_040 Hb_006501_170 Hb_006501_170 Hb_012098_170--Hb_006501_170 Hb_006573_300 Hb_006573_300 Hb_012098_170--Hb_006573_300 Hb_000645_240 Hb_000645_240 Hb_012098_170--Hb_000645_240 Hb_000679_240 Hb_000679_240 Hb_067034_030--Hb_000679_240 Hb_067034_030--Hb_006501_170 Hb_001248_030 Hb_001248_030 Hb_067034_030--Hb_001248_030 Hb_067034_030--Hb_000645_240 Hb_000521_300 Hb_000521_300 Hb_067034_030--Hb_000521_300 Hb_001114_070--Hb_006573_300 Hb_007676_020 Hb_007676_020 Hb_001114_070--Hb_007676_020 Hb_020805_170 Hb_020805_170 Hb_001114_070--Hb_020805_170 Hb_031862_040 Hb_031862_040 Hb_001114_070--Hb_031862_040 Hb_000853_060 Hb_000853_060 Hb_001114_070--Hb_000853_060 Hb_003576_050 Hb_003576_050 Hb_007919_040--Hb_003576_050 Hb_007919_040--Hb_000853_060 Hb_003517_020 Hb_003517_020 Hb_007919_040--Hb_003517_020 Hb_000928_040 Hb_000928_040 Hb_007919_040--Hb_000928_040 Hb_000367_310 Hb_000367_310 Hb_007919_040--Hb_000367_310 Hb_002291_020 Hb_002291_020 Hb_007919_040--Hb_002291_020 Hb_002518_270 Hb_002518_270 Hb_006501_170--Hb_002518_270 Hb_003106_210 Hb_003106_210 Hb_006501_170--Hb_003106_210 Hb_004218_160 Hb_004218_160 Hb_006501_170--Hb_004218_160 Hb_008948_080 Hb_008948_080 Hb_006501_170--Hb_008948_080 Hb_003371_140 Hb_003371_140 Hb_006501_170--Hb_003371_140 Hb_011214_140 Hb_011214_140 Hb_006501_170--Hb_011214_140 Hb_006573_300--Hb_000853_060 Hb_006453_010 Hb_006453_010 Hb_006573_300--Hb_006453_010 Hb_006573_300--Hb_007676_020 Hb_004195_090 Hb_004195_090 Hb_006573_300--Hb_004195_090 Hb_006573_300--Hb_020805_170 Hb_000866_090 Hb_000866_090 Hb_000645_240--Hb_000866_090 Hb_000022_180 Hb_000022_180 Hb_000645_240--Hb_000022_180 Hb_004976_040 Hb_004976_040 Hb_000645_240--Hb_004976_040 Hb_000866_370 Hb_000866_370 Hb_000645_240--Hb_000866_370 Hb_000081_120 Hb_000081_120 Hb_000645_240--Hb_000081_120 Hb_000345_340 Hb_000345_340 Hb_000645_240--Hb_000345_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.638118 0.0485373 0.0876526 0.0242538 0.046217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.109774 0.0791918 0.0692613 0.581322 0.12367

CAGE analysis