Hb_012114_070

Information

Type -
Description -
Location Contig12114: 47395-48531
Sequence    

Annotation

kegg
ID rcu:RCOM_1686660
description 2-deoxyglucose-6-phosphate phosphatase, putative
nr
ID XP_012086909.1
description PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
swissprot
ID P44004
description Uncharacterized protein HI_0488 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0488 PE=3 SV=1
trembl
ID A0A067JZK1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20596 PE=4 SV=1
Gene Ontology
ID GO:0016787
description phosphorylated carbohydrates phosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_06508: 46741-48773
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012114_070 0.0 - - PREDICTED: uncharacterized protein LOC105645812 [Jatropha curcas]
2 Hb_003038_240 0.0753818594 - - conserved hypothetical protein [Ricinus communis]
3 Hb_018133_020 0.0758061006 - - transporter, putative [Ricinus communis]
4 Hb_000155_200 0.0796039443 - - Rab7 [Hevea brasiliensis]
5 Hb_000614_220 0.083531529 - - PREDICTED: uncharacterized protein LOC105644756 [Jatropha curcas]
6 Hb_000614_160 0.0838546121 - - PREDICTED: pentatricopeptide repeat-containing protein At3g04130, mitochondrial [Jatropha curcas]
7 Hb_004157_020 0.0860956683 - - PREDICTED: histone H2B-like [Gossypium raimondii]
8 Hb_003077_020 0.0875782909 - - ABC transporter family protein [Hevea brasiliensis]
9 Hb_003728_060 0.0891877332 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
10 Hb_003124_150 0.0900089528 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 28-like [Jatropha curcas]
11 Hb_004195_270 0.0950965975 - - Ubiquitin-conjugating enzyme 16 [Theobroma cacao]
12 Hb_002799_110 0.0962390281 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
13 Hb_000193_110 0.0977533485 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
14 Hb_004109_170 0.0985817218 - - PREDICTED: probable ribokinase [Jatropha curcas]
15 Hb_029879_130 0.0990977566 - - Derlin-2, putative [Ricinus communis]
16 Hb_000729_030 0.0992169872 - - PREDICTED: dentin sialophosphoprotein [Jatropha curcas]
17 Hb_002871_190 0.0996318607 - - PREDICTED: uncharacterized protein LOC105628867 [Jatropha curcas]
18 Hb_000336_150 0.1001566662 - - ribulose-5-phosphate-3-epimerase, putative [Ricinus communis]
19 Hb_000260_030 0.1031959534 transcription factor TF Family: IWS1 transcription elongation factor s-II, putative [Ricinus communis]
20 Hb_000205_090 0.1032597699 - - hypothetical protein POPTR_0019s03570g [Populus trichocarpa]

Gene co-expression network

sample Hb_012114_070 Hb_012114_070 Hb_003038_240 Hb_003038_240 Hb_012114_070--Hb_003038_240 Hb_018133_020 Hb_018133_020 Hb_012114_070--Hb_018133_020 Hb_000155_200 Hb_000155_200 Hb_012114_070--Hb_000155_200 Hb_000614_220 Hb_000614_220 Hb_012114_070--Hb_000614_220 Hb_000614_160 Hb_000614_160 Hb_012114_070--Hb_000614_160 Hb_004157_020 Hb_004157_020 Hb_012114_070--Hb_004157_020 Hb_005162_060 Hb_005162_060 Hb_003038_240--Hb_005162_060 Hb_003124_150 Hb_003124_150 Hb_003038_240--Hb_003124_150 Hb_158445_010 Hb_158445_010 Hb_003038_240--Hb_158445_010 Hb_000729_030 Hb_000729_030 Hb_003038_240--Hb_000729_030 Hb_000336_150 Hb_000336_150 Hb_003038_240--Hb_000336_150 Hb_131181_010 Hb_131181_010 Hb_018133_020--Hb_131181_010 Hb_026053_020 Hb_026053_020 Hb_018133_020--Hb_026053_020 Hb_001279_080 Hb_001279_080 Hb_018133_020--Hb_001279_080 Hb_001318_260 Hb_001318_260 Hb_018133_020--Hb_001318_260 Hb_000840_180 Hb_000840_180 Hb_018133_020--Hb_000840_180 Hb_000205_090 Hb_000205_090 Hb_000155_200--Hb_000205_090 Hb_004109_170 Hb_004109_170 Hb_000155_200--Hb_004109_170 Hb_000367_160 Hb_000367_160 Hb_000155_200--Hb_000367_160 Hb_000120_960 Hb_000120_960 Hb_000155_200--Hb_000120_960 Hb_000340_570 Hb_000340_570 Hb_000155_200--Hb_000340_570 Hb_002799_110 Hb_002799_110 Hb_000614_220--Hb_002799_110 Hb_027654_060 Hb_027654_060 Hb_000614_220--Hb_027654_060 Hb_000614_220--Hb_000614_160 Hb_000510_290 Hb_000510_290 Hb_000614_220--Hb_000510_290 Hb_012675_050 Hb_012675_050 Hb_000614_220--Hb_012675_050 Hb_007389_010 Hb_007389_010 Hb_000614_160--Hb_007389_010 Hb_000260_030 Hb_000260_030 Hb_000614_160--Hb_000260_030 Hb_005496_140 Hb_005496_140 Hb_000614_160--Hb_005496_140 Hb_012019_010 Hb_012019_010 Hb_000614_160--Hb_012019_010 Hb_002046_180 Hb_002046_180 Hb_000614_160--Hb_002046_180 Hb_004889_020 Hb_004889_020 Hb_004157_020--Hb_004889_020 Hb_004410_080 Hb_004410_080 Hb_004157_020--Hb_004410_080 Hb_004157_020--Hb_018133_020 Hb_000633_020 Hb_000633_020 Hb_004157_020--Hb_000633_020 Hb_000676_390 Hb_000676_390 Hb_004157_020--Hb_000676_390 Hb_026889_030 Hb_026889_030 Hb_004157_020--Hb_026889_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.6168 22.4142 41.9451 29.0213 20.1491 21.9248
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
47.0127 65.6163 49.267 11.784 38.427

CAGE analysis