Hb_012264_010

Information

Type -
Description -
Location Contig12264: 982-1720
Sequence    

Annotation

kegg
ID rcu:RCOM_0304060
description hypothetical protein
nr
ID XP_012086191.1
description PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21104 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012264_010 0.0 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
2 Hb_002252_030 0.1118255434 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
3 Hb_010477_020 0.120188881 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
4 Hb_034132_010 0.1523820758 - - hypothetical protein B456_007G015400 [Gossypium raimondii]
5 Hb_000819_040 0.1556752774 - - ATP binding protein, putative [Ricinus communis]
6 Hb_000230_210 0.1600769341 - - PREDICTED: uncharacterized protein LOC105631864 [Jatropha curcas]
7 Hb_047955_010 0.1619699289 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
8 Hb_005618_020 0.1648973306 - - hypothetical protein RCOM_1342750 [Ricinus communis]
9 Hb_000340_060 0.1679316181 - - conserved hypothetical protein [Ricinus communis]
10 Hb_106810_010 0.1715148832 - - receptor serine/threonine kinase, putative [Ricinus communis]
11 Hb_157957_010 0.1717144127 - - hypothetical protein JCGZ_10722 [Jatropha curcas]
12 Hb_027506_060 0.1719993177 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
13 Hb_000359_230 0.1720712905 - - PREDICTED: putative DNA-binding protein ESCAROLA [Prunus mume]
14 Hb_002548_030 0.1734018769 - - PREDICTED: uncharacterized protein LOC103343650 [Prunus mume]
15 Hb_000086_600 0.1736303033 - - -
16 Hb_032966_010 0.1747141341 - - receptor serine/threonine kinase, putative [Ricinus communis]
17 Hb_000032_150 0.175323041 transcription factor TF Family: WRKY hypothetical protein RCOM_1691430 [Ricinus communis]
18 Hb_125201_010 0.1754665127 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
19 Hb_034581_010 0.1772460157 - - PREDICTED: acidic mammalian chitinase-like [Jatropha curcas]
20 Hb_000016_220 0.1783944159 transcription factor TF Family: AP2 CRT/DRE binding factor 1 [Hevea brasiliensis]

Gene co-expression network

sample Hb_012264_010 Hb_012264_010 Hb_002252_030 Hb_002252_030 Hb_012264_010--Hb_002252_030 Hb_010477_020 Hb_010477_020 Hb_012264_010--Hb_010477_020 Hb_034132_010 Hb_034132_010 Hb_012264_010--Hb_034132_010 Hb_000819_040 Hb_000819_040 Hb_012264_010--Hb_000819_040 Hb_000230_210 Hb_000230_210 Hb_012264_010--Hb_000230_210 Hb_047955_010 Hb_047955_010 Hb_012264_010--Hb_047955_010 Hb_002252_030--Hb_047955_010 Hb_157957_010 Hb_157957_010 Hb_002252_030--Hb_157957_010 Hb_000359_230 Hb_000359_230 Hb_002252_030--Hb_000359_230 Hb_002548_030 Hb_002548_030 Hb_002252_030--Hb_002548_030 Hb_002252_030--Hb_010477_020 Hb_034581_010 Hb_034581_010 Hb_002252_030--Hb_034581_010 Hb_010477_020--Hb_002548_030 Hb_010477_020--Hb_000359_230 Hb_010477_020--Hb_034581_010 Hb_110356_010 Hb_110356_010 Hb_010477_020--Hb_110356_010 Hb_099188_010 Hb_099188_010 Hb_010477_020--Hb_099188_010 Hb_001565_050 Hb_001565_050 Hb_034132_010--Hb_001565_050 Hb_015978_040 Hb_015978_040 Hb_034132_010--Hb_015978_040 Hb_022768_010 Hb_022768_010 Hb_034132_010--Hb_022768_010 Hb_117602_010 Hb_117602_010 Hb_034132_010--Hb_117602_010 Hb_005843_080 Hb_005843_080 Hb_034132_010--Hb_005843_080 Hb_005725_180 Hb_005725_180 Hb_034132_010--Hb_005725_180 Hb_000045_140 Hb_000045_140 Hb_000819_040--Hb_000045_140 Hb_000819_040--Hb_000230_210 Hb_181824_010 Hb_181824_010 Hb_000819_040--Hb_181824_010 Hb_000340_060 Hb_000340_060 Hb_000819_040--Hb_000340_060 Hb_181810_010 Hb_181810_010 Hb_000819_040--Hb_181810_010 Hb_003375_080 Hb_003375_080 Hb_000819_040--Hb_003375_080 Hb_000016_220 Hb_000016_220 Hb_000230_210--Hb_000016_220 Hb_005618_020 Hb_005618_020 Hb_000230_210--Hb_005618_020 Hb_000230_210--Hb_022768_010 Hb_002849_030 Hb_002849_030 Hb_000230_210--Hb_002849_030 Hb_000230_210--Hb_034132_010 Hb_106810_010 Hb_106810_010 Hb_000230_210--Hb_106810_010 Hb_000032_150 Hb_000032_150 Hb_047955_010--Hb_000032_150 Hb_003207_230 Hb_003207_230 Hb_047955_010--Hb_003207_230 Hb_047955_010--Hb_000359_230 Hb_124953_010 Hb_124953_010 Hb_047955_010--Hb_124953_010 Hb_047955_010--Hb_157957_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0472545 0.772131 0.259579 0.101907 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis